Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17715 | 53368;53369;53370 | chr2:178607545;178607544;178607543 | chr2:179472272;179472271;179472270 |
N2AB | 16074 | 48445;48446;48447 | chr2:178607545;178607544;178607543 | chr2:179472272;179472271;179472270 |
N2A | 15147 | 45664;45665;45666 | chr2:178607545;178607544;178607543 | chr2:179472272;179472271;179472270 |
N2B | 8650 | 26173;26174;26175 | chr2:178607545;178607544;178607543 | chr2:179472272;179472271;179472270 |
Novex-1 | 8775 | 26548;26549;26550 | chr2:178607545;178607544;178607543 | chr2:179472272;179472271;179472270 |
Novex-2 | 8842 | 26749;26750;26751 | chr2:178607545;178607544;178607543 | chr2:179472272;179472271;179472270 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | None | None | 0.767 | N | 0.367 | 0.203 | 0.3085936734 | gnomAD-4.0.0 | 1.59232E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 2.41546E-04 | 0 | 0 | 0 |
K/N | rs2055193492 | None | 0.999 | N | 0.593 | 0.3 | 0.349429436713 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
K/N | rs2055193492 | None | 0.999 | N | 0.593 | 0.3 | 0.349429436713 | gnomAD-4.0.0 | 6.57843E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47202E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2293 | likely_benign | 0.2135 | benign | 0.087 | Stabilizing | 0.997 | D | 0.558 | neutral | None | None | None | None | N |
K/C | 0.7005 | likely_pathogenic | 0.6902 | pathogenic | -0.068 | Destabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | N |
K/D | 0.3854 | ambiguous | 0.3823 | ambiguous | 0.102 | Stabilizing | 0.994 | D | 0.562 | neutral | None | None | None | None | N |
K/E | 0.1199 | likely_benign | 0.1181 | benign | 0.114 | Stabilizing | 0.767 | D | 0.367 | neutral | N | 0.474989888 | None | None | N |
K/F | 0.7389 | likely_pathogenic | 0.7529 | pathogenic | -0.092 | Destabilizing | 1.0 | D | 0.653 | neutral | None | None | None | None | N |
K/G | 0.2967 | likely_benign | 0.2908 | benign | -0.123 | Destabilizing | 1.0 | D | 0.495 | neutral | None | None | None | None | N |
K/H | 0.3419 | ambiguous | 0.3336 | benign | -0.427 | Destabilizing | 1.0 | D | 0.619 | neutral | None | None | None | None | N |
K/I | 0.3252 | likely_benign | 0.3215 | benign | 0.564 | Stabilizing | 1.0 | D | 0.661 | neutral | D | 0.523189267 | None | None | N |
K/L | 0.3265 | likely_benign | 0.3212 | benign | 0.564 | Stabilizing | 1.0 | D | 0.514 | neutral | None | None | None | None | N |
K/M | 0.2183 | likely_benign | 0.212 | benign | 0.311 | Stabilizing | 1.0 | D | 0.621 | neutral | None | None | None | None | N |
K/N | 0.3117 | likely_benign | 0.3108 | benign | 0.343 | Stabilizing | 0.999 | D | 0.593 | neutral | N | 0.455617481 | None | None | N |
K/P | 0.3514 | ambiguous | 0.3006 | benign | 0.433 | Stabilizing | 1.0 | D | 0.618 | neutral | None | None | None | None | N |
K/Q | 0.1452 | likely_benign | 0.1386 | benign | 0.188 | Stabilizing | 0.999 | D | 0.569 | neutral | N | 0.499810975 | None | None | N |
K/R | 0.0958 | likely_benign | 0.0974 | benign | 0.004 | Stabilizing | 0.996 | D | 0.549 | neutral | N | 0.500677767 | None | None | N |
K/S | 0.2904 | likely_benign | 0.276 | benign | -0.121 | Destabilizing | 0.997 | D | 0.566 | neutral | None | None | None | None | N |
K/T | 0.1364 | likely_benign | 0.1293 | benign | 0.04 | Stabilizing | 0.999 | D | 0.567 | neutral | N | 0.471605654 | None | None | N |
K/V | 0.2855 | likely_benign | 0.2749 | benign | 0.433 | Stabilizing | 1.0 | D | 0.595 | neutral | None | None | None | None | N |
K/W | 0.7349 | likely_pathogenic | 0.7397 | pathogenic | -0.128 | Destabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | N |
K/Y | 0.6093 | likely_pathogenic | 0.6255 | pathogenic | 0.229 | Stabilizing | 1.0 | D | 0.615 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.