Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17728 | 53407;53408;53409 | chr2:178607506;178607505;178607504 | chr2:179472233;179472232;179472231 |
N2AB | 16087 | 48484;48485;48486 | chr2:178607506;178607505;178607504 | chr2:179472233;179472232;179472231 |
N2A | 15160 | 45703;45704;45705 | chr2:178607506;178607505;178607504 | chr2:179472233;179472232;179472231 |
N2B | 8663 | 26212;26213;26214 | chr2:178607506;178607505;178607504 | chr2:179472233;179472232;179472231 |
Novex-1 | 8788 | 26587;26588;26589 | chr2:178607506;178607505;178607504 | chr2:179472233;179472232;179472231 |
Novex-2 | 8855 | 26788;26789;26790 | chr2:178607506;178607505;178607504 | chr2:179472233;179472232;179472231 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | 0.055 | N | 0.379 | 0.26 | 0.236890367714 | gnomAD-4.0.0 | 6.84391E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.6575E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2956 | likely_benign | 0.3305 | benign | -0.949 | Destabilizing | 0.012 | N | 0.463 | neutral | N | 0.450403662 | None | None | N |
E/C | 0.8479 | likely_pathogenic | 0.8625 | pathogenic | -0.681 | Destabilizing | 0.864 | D | 0.583 | neutral | None | None | None | None | N |
E/D | 0.3202 | likely_benign | 0.3919 | ambiguous | -1.618 | Destabilizing | None | N | 0.177 | neutral | N | 0.468162704 | None | None | N |
E/F | 0.7946 | likely_pathogenic | 0.8078 | pathogenic | -0.613 | Destabilizing | None | N | 0.476 | neutral | None | None | None | None | N |
E/G | 0.4676 | ambiguous | 0.5294 | ambiguous | -1.361 | Destabilizing | 0.055 | N | 0.491 | neutral | N | 0.45244389 | None | None | N |
E/H | 0.6442 | likely_pathogenic | 0.6679 | pathogenic | -0.963 | Destabilizing | 0.356 | N | 0.544 | neutral | None | None | None | None | N |
E/I | 0.3622 | ambiguous | 0.3825 | ambiguous | 0.197 | Stabilizing | None | N | 0.399 | neutral | None | None | None | None | N |
E/K | 0.3928 | ambiguous | 0.4198 | ambiguous | -1.101 | Destabilizing | 0.055 | N | 0.379 | neutral | N | 0.403919224 | None | None | N |
E/L | 0.5215 | ambiguous | 0.5443 | ambiguous | 0.197 | Stabilizing | None | N | 0.411 | neutral | None | None | None | None | N |
E/M | 0.5039 | ambiguous | 0.5214 | ambiguous | 0.759 | Stabilizing | 0.214 | N | 0.564 | neutral | None | None | None | None | N |
E/N | 0.4607 | ambiguous | 0.5265 | ambiguous | -1.488 | Destabilizing | 0.038 | N | 0.461 | neutral | None | None | None | None | N |
E/P | 0.9909 | likely_pathogenic | 0.9936 | pathogenic | -0.164 | Destabilizing | 0.356 | N | 0.589 | neutral | None | None | None | None | N |
E/Q | 0.2449 | likely_benign | 0.2487 | benign | -1.27 | Destabilizing | 0.055 | N | 0.477 | neutral | N | 0.439898667 | None | None | N |
E/R | 0.5682 | likely_pathogenic | 0.5968 | pathogenic | -0.953 | Destabilizing | 0.214 | N | 0.503 | neutral | None | None | None | None | N |
E/S | 0.3163 | likely_benign | 0.3633 | ambiguous | -1.962 | Destabilizing | 0.016 | N | 0.338 | neutral | None | None | None | None | N |
E/T | 0.2747 | likely_benign | 0.3096 | benign | -1.601 | Destabilizing | 0.001 | N | 0.299 | neutral | None | None | None | None | N |
E/V | 0.2164 | likely_benign | 0.2217 | benign | -0.164 | Destabilizing | None | N | 0.355 | neutral | N | 0.413482857 | None | None | N |
E/W | 0.9409 | likely_pathogenic | 0.9444 | pathogenic | -0.58 | Destabilizing | 0.864 | D | 0.603 | neutral | None | None | None | None | N |
E/Y | 0.732 | likely_pathogenic | 0.7495 | pathogenic | -0.401 | Destabilizing | 0.12 | N | 0.599 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.