Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17734 | 53425;53426;53427 | chr2:178607488;178607487;178607486 | chr2:179472215;179472214;179472213 |
N2AB | 16093 | 48502;48503;48504 | chr2:178607488;178607487;178607486 | chr2:179472215;179472214;179472213 |
N2A | 15166 | 45721;45722;45723 | chr2:178607488;178607487;178607486 | chr2:179472215;179472214;179472213 |
N2B | 8669 | 26230;26231;26232 | chr2:178607488;178607487;178607486 | chr2:179472215;179472214;179472213 |
Novex-1 | 8794 | 26605;26606;26607 | chr2:178607488;178607487;178607486 | chr2:179472215;179472214;179472213 |
Novex-2 | 8861 | 26806;26807;26808 | chr2:178607488;178607487;178607486 | chr2:179472215;179472214;179472213 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | None | None | 0.576 | N | 0.381 | 0.263 | 0.40032279838 | gnomAD-4.0.0 | 1.59228E-06 | None | None | None | None | N | None | 0 | 2.28666E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.4467 | ambiguous | 0.4383 | ambiguous | -1.7 | Destabilizing | 1.0 | D | 0.667 | neutral | None | None | None | None | N |
A/D | 0.9823 | likely_pathogenic | 0.9903 | pathogenic | -2.338 | Highly Destabilizing | 0.998 | D | 0.723 | prob.delet. | None | None | None | None | N |
A/E | 0.9781 | likely_pathogenic | 0.9887 | pathogenic | -2.289 | Highly Destabilizing | 0.997 | D | 0.702 | prob.neutral | N | 0.521694846 | None | None | N |
A/F | 0.943 | likely_pathogenic | 0.9697 | pathogenic | -1.227 | Destabilizing | 0.998 | D | 0.711 | prob.delet. | None | None | None | None | N |
A/G | 0.475 | ambiguous | 0.5685 | pathogenic | -1.558 | Destabilizing | 0.989 | D | 0.587 | neutral | N | 0.521441356 | None | None | N |
A/H | 0.9831 | likely_pathogenic | 0.9895 | pathogenic | -1.551 | Destabilizing | 1.0 | D | 0.694 | prob.neutral | None | None | None | None | N |
A/I | 0.458 | ambiguous | 0.6045 | pathogenic | -0.533 | Destabilizing | 0.967 | D | 0.646 | neutral | None | None | None | None | N |
A/K | 0.9925 | likely_pathogenic | 0.9959 | pathogenic | -1.392 | Destabilizing | 0.995 | D | 0.705 | prob.neutral | None | None | None | None | N |
A/L | 0.6211 | likely_pathogenic | 0.7015 | pathogenic | -0.533 | Destabilizing | 0.967 | D | 0.545 | neutral | None | None | None | None | N |
A/M | 0.7052 | likely_pathogenic | 0.7861 | pathogenic | -0.739 | Destabilizing | 0.999 | D | 0.691 | prob.neutral | None | None | None | None | N |
A/N | 0.9199 | likely_pathogenic | 0.9524 | pathogenic | -1.468 | Destabilizing | 0.998 | D | 0.706 | prob.neutral | None | None | None | None | N |
A/P | 0.873 | likely_pathogenic | 0.9061 | pathogenic | -0.736 | Destabilizing | 0.999 | D | 0.719 | prob.delet. | N | 0.492069701 | None | None | N |
A/Q | 0.9675 | likely_pathogenic | 0.98 | pathogenic | -1.589 | Destabilizing | 0.999 | D | 0.689 | prob.neutral | None | None | None | None | N |
A/R | 0.9798 | likely_pathogenic | 0.9879 | pathogenic | -1.111 | Destabilizing | 0.998 | D | 0.703 | prob.neutral | None | None | None | None | N |
A/S | 0.1902 | likely_benign | 0.2044 | benign | -1.837 | Destabilizing | 0.956 | D | 0.553 | neutral | N | 0.510590903 | None | None | N |
A/T | 0.1596 | likely_benign | 0.1744 | benign | -1.693 | Destabilizing | 0.576 | D | 0.381 | neutral | N | 0.483385659 | None | None | N |
A/V | 0.2003 | likely_benign | 0.2562 | benign | -0.736 | Destabilizing | 0.37 | N | 0.332 | neutral | N | 0.471237507 | None | None | N |
A/W | 0.9958 | likely_pathogenic | 0.9977 | pathogenic | -1.62 | Destabilizing | 1.0 | D | 0.691 | prob.neutral | None | None | None | None | N |
A/Y | 0.9802 | likely_pathogenic | 0.9906 | pathogenic | -1.197 | Destabilizing | 0.999 | D | 0.716 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.