Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17739 | 53440;53441;53442 | chr2:178607473;178607472;178607471 | chr2:179472200;179472199;179472198 |
N2AB | 16098 | 48517;48518;48519 | chr2:178607473;178607472;178607471 | chr2:179472200;179472199;179472198 |
N2A | 15171 | 45736;45737;45738 | chr2:178607473;178607472;178607471 | chr2:179472200;179472199;179472198 |
N2B | 8674 | 26245;26246;26247 | chr2:178607473;178607472;178607471 | chr2:179472200;179472199;179472198 |
Novex-1 | 8799 | 26620;26621;26622 | chr2:178607473;178607472;178607471 | chr2:179472200;179472199;179472198 |
Novex-2 | 8866 | 26821;26822;26823 | chr2:178607473;178607472;178607471 | chr2:179472200;179472199;179472198 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/L | None | None | 0.959 | N | 0.515 | 0.294 | 0.663800828988 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
H/N | rs1419607621 | 0.145 | 0.959 | N | 0.478 | 0.297 | 0.280181792013 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 6.48E-05 | 0 |
H/N | rs1419607621 | 0.145 | 0.959 | N | 0.478 | 0.297 | 0.280181792013 | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
H/N | rs1419607621 | 0.145 | 0.959 | N | 0.478 | 0.297 | 0.280181792013 | gnomAD-4.0.0 | 7.69235E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.43707E-05 | 0 | 0 |
H/R | rs1488100561 | None | 0.979 | N | 0.533 | 0.325 | 0.281780670237 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
H/R | rs1488100561 | None | 0.979 | N | 0.533 | 0.325 | 0.281780670237 | gnomAD-4.0.0 | 6.57722E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47171E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.4367 | ambiguous | 0.6326 | pathogenic | -0.353 | Destabilizing | 0.864 | D | 0.363 | neutral | None | None | None | None | N |
H/C | 0.2485 | likely_benign | 0.3624 | ambiguous | 0.567 | Stabilizing | 0.039 | N | 0.346 | neutral | None | None | None | None | N |
H/D | 0.5016 | ambiguous | 0.714 | pathogenic | -0.158 | Destabilizing | 0.959 | D | 0.528 | neutral | N | 0.435548853 | None | None | N |
H/E | 0.5677 | likely_pathogenic | 0.7741 | pathogenic | -0.095 | Destabilizing | 0.969 | D | 0.477 | neutral | None | None | None | None | N |
H/F | 0.5133 | ambiguous | 0.6571 | pathogenic | 0.486 | Stabilizing | 0.999 | D | 0.612 | neutral | None | None | None | None | N |
H/G | 0.4405 | ambiguous | 0.5817 | pathogenic | -0.688 | Destabilizing | 0.927 | D | 0.473 | neutral | None | None | None | None | N |
H/I | 0.7048 | likely_pathogenic | 0.8773 | pathogenic | 0.548 | Stabilizing | 0.995 | D | 0.554 | neutral | None | None | None | None | N |
H/K | 0.4525 | ambiguous | 0.6685 | pathogenic | -0.183 | Destabilizing | 0.969 | D | 0.533 | neutral | None | None | None | None | N |
H/L | 0.356 | ambiguous | 0.5688 | pathogenic | 0.548 | Stabilizing | 0.959 | D | 0.515 | neutral | N | 0.50125377 | None | None | N |
H/M | 0.6671 | likely_pathogenic | 0.8198 | pathogenic | 0.489 | Stabilizing | 0.999 | D | 0.499 | neutral | None | None | None | None | N |
H/N | 0.1901 | likely_benign | 0.3405 | ambiguous | -0.019 | Destabilizing | 0.959 | D | 0.478 | neutral | N | 0.454307972 | None | None | N |
H/P | 0.7372 | likely_pathogenic | 0.8607 | pathogenic | 0.27 | Stabilizing | 0.994 | D | 0.565 | neutral | N | 0.49378908 | None | None | N |
H/Q | 0.3346 | likely_benign | 0.5357 | ambiguous | 0.16 | Stabilizing | 0.994 | D | 0.568 | neutral | N | 0.445611131 | None | None | N |
H/R | 0.2276 | likely_benign | 0.3943 | ambiguous | -0.746 | Destabilizing | 0.979 | D | 0.533 | neutral | N | 0.431143111 | None | None | N |
H/S | 0.2951 | likely_benign | 0.4442 | ambiguous | -0.007 | Destabilizing | 0.546 | D | 0.211 | neutral | None | None | None | None | N |
H/T | 0.3696 | ambiguous | 0.5735 | pathogenic | 0.147 | Stabilizing | 0.939 | D | 0.511 | neutral | None | None | None | None | N |
H/V | 0.5905 | likely_pathogenic | 0.8032 | pathogenic | 0.27 | Stabilizing | 0.969 | D | 0.532 | neutral | None | None | None | None | N |
H/W | 0.576 | likely_pathogenic | 0.7199 | pathogenic | 0.59 | Stabilizing | 1.0 | D | 0.487 | neutral | None | None | None | None | N |
H/Y | 0.2035 | likely_benign | 0.3309 | benign | 0.831 | Stabilizing | 0.993 | D | 0.489 | neutral | N | 0.493962438 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.