Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17765 | 53518;53519;53520 | chr2:178607309;178607308;178607307 | chr2:179472036;179472035;179472034 |
N2AB | 16124 | 48595;48596;48597 | chr2:178607309;178607308;178607307 | chr2:179472036;179472035;179472034 |
N2A | 15197 | 45814;45815;45816 | chr2:178607309;178607308;178607307 | chr2:179472036;179472035;179472034 |
N2B | 8700 | 26323;26324;26325 | chr2:178607309;178607308;178607307 | chr2:179472036;179472035;179472034 |
Novex-1 | 8825 | 26698;26699;26700 | chr2:178607309;178607308;178607307 | chr2:179472036;179472035;179472034 |
Novex-2 | 8892 | 26899;26900;26901 | chr2:178607309;178607308;178607307 | chr2:179472036;179472035;179472034 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | rs1298494593 | -0.616 | 1.0 | D | 0.891 | 0.708 | 0.745525825506 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.93E-06 | 0 |
P/S | rs1298494593 | -0.616 | 1.0 | D | 0.891 | 0.708 | 0.745525825506 | gnomAD-4.0.0 | 1.59458E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86241E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.9591 | likely_pathogenic | 0.9062 | pathogenic | -1.596 | Destabilizing | 0.999 | D | 0.839 | deleterious | D | 0.598464633 | None | None | I |
P/C | 0.9959 | likely_pathogenic | 0.9914 | pathogenic | -1.845 | Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | I |
P/D | 0.9997 | likely_pathogenic | 0.9993 | pathogenic | -3.162 | Highly Destabilizing | 1.0 | D | 0.89 | deleterious | None | None | None | None | I |
P/E | 0.9993 | likely_pathogenic | 0.9981 | pathogenic | -3.104 | Highly Destabilizing | 1.0 | D | 0.895 | deleterious | None | None | None | None | I |
P/F | 0.9999 | likely_pathogenic | 0.9996 | pathogenic | -1.149 | Destabilizing | 1.0 | D | 0.913 | deleterious | None | None | None | None | I |
P/G | 0.9972 | likely_pathogenic | 0.9951 | pathogenic | -1.916 | Destabilizing | 1.0 | D | 0.902 | deleterious | None | None | None | None | I |
P/H | 0.9994 | likely_pathogenic | 0.998 | pathogenic | -1.365 | Destabilizing | 1.0 | D | 0.9 | deleterious | D | 0.636448555 | None | None | I |
P/I | 0.9981 | likely_pathogenic | 0.9938 | pathogenic | -0.774 | Destabilizing | 1.0 | D | 0.868 | deleterious | None | None | None | None | I |
P/K | 0.9996 | likely_pathogenic | 0.999 | pathogenic | -1.443 | Destabilizing | 1.0 | D | 0.891 | deleterious | None | None | None | None | I |
P/L | 0.9911 | likely_pathogenic | 0.9749 | pathogenic | -0.774 | Destabilizing | 1.0 | D | 0.894 | deleterious | D | 0.62022739 | None | None | I |
P/M | 0.999 | likely_pathogenic | 0.9974 | pathogenic | -0.997 | Destabilizing | 1.0 | D | 0.891 | deleterious | None | None | None | None | I |
P/N | 0.9998 | likely_pathogenic | 0.9993 | pathogenic | -1.693 | Destabilizing | 1.0 | D | 0.914 | deleterious | None | None | None | None | I |
P/Q | 0.9992 | likely_pathogenic | 0.9975 | pathogenic | -1.862 | Destabilizing | 1.0 | D | 0.899 | deleterious | None | None | None | None | I |
P/R | 0.9985 | likely_pathogenic | 0.9951 | pathogenic | -0.975 | Destabilizing | 1.0 | D | 0.912 | deleterious | D | 0.636246751 | None | None | I |
P/S | 0.9965 | likely_pathogenic | 0.9904 | pathogenic | -2.024 | Highly Destabilizing | 1.0 | D | 0.891 | deleterious | D | 0.636044947 | None | None | I |
P/T | 0.9949 | likely_pathogenic | 0.9857 | pathogenic | -1.867 | Destabilizing | 1.0 | D | 0.888 | deleterious | D | 0.62022739 | None | None | I |
P/V | 0.9926 | likely_pathogenic | 0.9806 | pathogenic | -1.02 | Destabilizing | 1.0 | D | 0.891 | deleterious | None | None | None | None | I |
P/W | 0.9999 | likely_pathogenic | 0.9998 | pathogenic | -1.468 | Destabilizing | 1.0 | D | 0.876 | deleterious | None | None | None | None | I |
P/Y | 0.9999 | likely_pathogenic | 0.9996 | pathogenic | -1.136 | Destabilizing | 1.0 | D | 0.917 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.