Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1778 | 5557;5558;5559 | chr2:178776532;178776531;178776530 | chr2:179641259;179641258;179641257 |
N2AB | 1778 | 5557;5558;5559 | chr2:178776532;178776531;178776530 | chr2:179641259;179641258;179641257 |
N2A | 1778 | 5557;5558;5559 | chr2:178776532;178776531;178776530 | chr2:179641259;179641258;179641257 |
N2B | 1732 | 5419;5420;5421 | chr2:178776532;178776531;178776530 | chr2:179641259;179641258;179641257 |
Novex-1 | 1732 | 5419;5420;5421 | chr2:178776532;178776531;178776530 | chr2:179641259;179641258;179641257 |
Novex-2 | 1732 | 5419;5420;5421 | chr2:178776532;178776531;178776530 | chr2:179641259;179641258;179641257 |
Novex-3 | 1778 | 5557;5558;5559 | chr2:178776532;178776531;178776530 | chr2:179641259;179641258;179641257 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/K | None | None | 0.997 | N | 0.553 | 0.369 | 0.311387274539 | gnomAD-4.0.0 | 1.60005E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02334E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.9089 | likely_pathogenic | 0.9275 | pathogenic | -0.997 | Destabilizing | 0.999 | D | 0.69 | prob.neutral | None | None | None | None | N |
R/C | 0.5723 | likely_pathogenic | 0.6052 | pathogenic | -0.908 | Destabilizing | 1.0 | D | 0.856 | deleterious | None | None | None | None | N |
R/D | 0.9873 | likely_pathogenic | 0.991 | pathogenic | -0.384 | Destabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | N |
R/E | 0.8317 | likely_pathogenic | 0.8636 | pathogenic | -0.243 | Destabilizing | 0.999 | D | 0.697 | prob.neutral | None | None | None | None | N |
R/F | 0.9436 | likely_pathogenic | 0.9558 | pathogenic | -0.7 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
R/G | 0.9249 | likely_pathogenic | 0.9417 | pathogenic | -1.338 | Destabilizing | 1.0 | D | 0.822 | deleterious | D | 0.667630198 | None | None | N |
R/H | 0.2731 | likely_benign | 0.3079 | benign | -1.533 | Destabilizing | 1.0 | D | 0.808 | deleterious | None | None | None | None | N |
R/I | 0.6634 | likely_pathogenic | 0.7114 | pathogenic | -0.061 | Destabilizing | 1.0 | D | 0.86 | deleterious | N | 0.501573347 | None | None | N |
R/K | 0.169 | likely_benign | 0.1861 | benign | -1.108 | Destabilizing | 0.997 | D | 0.553 | neutral | N | 0.495396009 | None | None | N |
R/L | 0.6789 | likely_pathogenic | 0.7311 | pathogenic | -0.061 | Destabilizing | 1.0 | D | 0.822 | deleterious | None | None | None | None | N |
R/M | 0.7696 | likely_pathogenic | 0.8138 | pathogenic | -0.315 | Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
R/N | 0.9534 | likely_pathogenic | 0.9664 | pathogenic | -0.602 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
R/P | 0.9982 | likely_pathogenic | 0.9984 | pathogenic | -0.354 | Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
R/Q | 0.2312 | likely_benign | 0.2639 | benign | -0.712 | Destabilizing | 1.0 | D | 0.798 | deleterious | None | None | None | None | N |
R/S | 0.923 | likely_pathogenic | 0.9429 | pathogenic | -1.354 | Destabilizing | 1.0 | D | 0.821 | deleterious | N | 0.501101023 | None | None | N |
R/T | 0.7159 | likely_pathogenic | 0.7664 | pathogenic | -1.024 | Destabilizing | 1.0 | D | 0.815 | deleterious | N | 0.50896261 | None | None | N |
R/V | 0.7096 | likely_pathogenic | 0.7526 | pathogenic | -0.354 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
R/W | 0.7169 | likely_pathogenic | 0.7563 | pathogenic | -0.318 | Destabilizing | 1.0 | D | 0.822 | deleterious | None | None | None | None | N |
R/Y | 0.8703 | likely_pathogenic | 0.8976 | pathogenic | -0.038 | Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.