Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17790 | 53593;53594;53595 | chr2:178607234;178607233;178607232 | chr2:179471961;179471960;179471959 |
N2AB | 16149 | 48670;48671;48672 | chr2:178607234;178607233;178607232 | chr2:179471961;179471960;179471959 |
N2A | 15222 | 45889;45890;45891 | chr2:178607234;178607233;178607232 | chr2:179471961;179471960;179471959 |
N2B | 8725 | 26398;26399;26400 | chr2:178607234;178607233;178607232 | chr2:179471961;179471960;179471959 |
Novex-1 | 8850 | 26773;26774;26775 | chr2:178607234;178607233;178607232 | chr2:179471961;179471960;179471959 |
Novex-2 | 8917 | 26974;26975;26976 | chr2:178607234;178607233;178607232 | chr2:179471961;179471960;179471959 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/G | None | None | 1.0 | N | 0.682 | 0.533 | 0.429435026966 | gnomAD-4.0.0 | 2.05361E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69935E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.9049 | likely_pathogenic | 0.7905 | pathogenic | -0.202 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | N | 0.479558311 | None | None | I |
D/C | 0.9764 | likely_pathogenic | 0.9508 | pathogenic | 0.189 | Stabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | I |
D/E | 0.7973 | likely_pathogenic | 0.6877 | pathogenic | -0.313 | Destabilizing | 1.0 | D | 0.375 | neutral | N | 0.467695027 | None | None | I |
D/F | 0.9586 | likely_pathogenic | 0.896 | pathogenic | -0.339 | Destabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | I |
D/G | 0.8825 | likely_pathogenic | 0.7694 | pathogenic | -0.378 | Destabilizing | 1.0 | D | 0.682 | prob.neutral | N | 0.489775755 | None | None | I |
D/H | 0.9333 | likely_pathogenic | 0.8493 | pathogenic | -0.266 | Destabilizing | 1.0 | D | 0.623 | neutral | N | 0.475292351 | None | None | I |
D/I | 0.8936 | likely_pathogenic | 0.8296 | pathogenic | 0.203 | Stabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | I |
D/K | 0.9602 | likely_pathogenic | 0.9168 | pathogenic | 0.315 | Stabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | I |
D/L | 0.9274 | likely_pathogenic | 0.877 | pathogenic | 0.203 | Stabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | I |
D/M | 0.9658 | likely_pathogenic | 0.9416 | pathogenic | 0.405 | Stabilizing | 1.0 | D | 0.695 | prob.neutral | None | None | None | None | I |
D/N | 0.4569 | ambiguous | 0.3759 | ambiguous | 0.165 | Stabilizing | 1.0 | D | 0.629 | neutral | N | 0.490022764 | None | None | I |
D/P | 0.9964 | likely_pathogenic | 0.9941 | pathogenic | 0.09 | Stabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | I |
D/Q | 0.9574 | likely_pathogenic | 0.9119 | pathogenic | 0.177 | Stabilizing | 1.0 | D | 0.696 | prob.neutral | None | None | None | None | I |
D/R | 0.9701 | likely_pathogenic | 0.9336 | pathogenic | 0.388 | Stabilizing | 1.0 | D | 0.722 | prob.delet. | None | None | None | None | I |
D/S | 0.8139 | likely_pathogenic | 0.6611 | pathogenic | 0.053 | Stabilizing | 1.0 | D | 0.658 | neutral | None | None | None | None | I |
D/T | 0.8585 | likely_pathogenic | 0.8073 | pathogenic | 0.182 | Stabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | I |
D/V | 0.8091 | likely_pathogenic | 0.6903 | pathogenic | 0.09 | Stabilizing | 1.0 | D | 0.751 | deleterious | N | 0.483672915 | None | None | I |
D/W | 0.9925 | likely_pathogenic | 0.9815 | pathogenic | -0.285 | Destabilizing | 1.0 | D | 0.704 | prob.neutral | None | None | None | None | I |
D/Y | 0.8212 | likely_pathogenic | 0.589 | pathogenic | -0.124 | Destabilizing | 1.0 | D | 0.667 | neutral | N | 0.507224445 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.