Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17797 | 53614;53615;53616 | chr2:178607213;178607212;178607211 | chr2:179471940;179471939;179471938 |
N2AB | 16156 | 48691;48692;48693 | chr2:178607213;178607212;178607211 | chr2:179471940;179471939;179471938 |
N2A | 15229 | 45910;45911;45912 | chr2:178607213;178607212;178607211 | chr2:179471940;179471939;179471938 |
N2B | 8732 | 26419;26420;26421 | chr2:178607213;178607212;178607211 | chr2:179471940;179471939;179471938 |
Novex-1 | 8857 | 26794;26795;26796 | chr2:178607213;178607212;178607211 | chr2:179471940;179471939;179471938 |
Novex-2 | 8924 | 26995;26996;26997 | chr2:178607213;178607212;178607211 | chr2:179471940;179471939;179471938 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs727503610 | -0.036 | 0.059 | N | 0.292 | 0.154 | 0.294561560033 | gnomAD-2.1.1 | 1.07E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 2.35E-05 | 0 |
T/I | rs727503610 | -0.036 | 0.059 | N | 0.292 | 0.154 | 0.294561560033 | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
T/I | rs727503610 | -0.036 | 0.059 | N | 0.292 | 0.154 | 0.294561560033 | gnomAD-4.0.0 | 4.34004E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.08763E-06 | 0 | 1.6022E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1642 | likely_benign | 0.1588 | benign | -0.71 | Destabilizing | 0.896 | D | 0.469 | neutral | N | 0.508403896 | None | None | I |
T/C | 0.5165 | ambiguous | 0.5607 | ambiguous | -0.464 | Destabilizing | 0.999 | D | 0.637 | neutral | None | None | None | None | I |
T/D | 0.6807 | likely_pathogenic | 0.5885 | pathogenic | -0.132 | Destabilizing | 0.996 | D | 0.626 | neutral | None | None | None | None | I |
T/E | 0.5611 | ambiguous | 0.4716 | ambiguous | -0.164 | Destabilizing | 0.996 | D | 0.604 | neutral | None | None | None | None | I |
T/F | 0.4879 | ambiguous | 0.4427 | ambiguous | -0.884 | Destabilizing | 0.076 | N | 0.347 | neutral | None | None | None | None | I |
T/G | 0.4405 | ambiguous | 0.4322 | ambiguous | -0.927 | Destabilizing | 0.996 | D | 0.559 | neutral | None | None | None | None | I |
T/H | 0.4822 | ambiguous | 0.4532 | ambiguous | -1.221 | Destabilizing | 0.999 | D | 0.698 | prob.neutral | None | None | None | None | I |
T/I | 0.257 | likely_benign | 0.2145 | benign | -0.237 | Destabilizing | 0.059 | N | 0.292 | neutral | N | 0.500282617 | None | None | I |
T/K | 0.4761 | ambiguous | 0.3602 | ambiguous | -0.684 | Destabilizing | 0.984 | D | 0.623 | neutral | N | 0.470042566 | None | None | I |
T/L | 0.1523 | likely_benign | 0.1503 | benign | -0.237 | Destabilizing | 0.702 | D | 0.532 | neutral | None | None | None | None | I |
T/M | 0.1258 | likely_benign | 0.1257 | benign | 0.072 | Stabilizing | 0.976 | D | 0.639 | neutral | None | None | None | None | I |
T/N | 0.2515 | likely_benign | 0.2282 | benign | -0.535 | Destabilizing | 0.996 | D | 0.559 | neutral | None | None | None | None | I |
T/P | 0.6511 | likely_pathogenic | 0.5708 | pathogenic | -0.363 | Destabilizing | 0.995 | D | 0.638 | neutral | N | 0.521534628 | None | None | I |
T/Q | 0.4034 | ambiguous | 0.3697 | ambiguous | -0.773 | Destabilizing | 0.996 | D | 0.643 | neutral | None | None | None | None | I |
T/R | 0.4503 | ambiguous | 0.341 | ambiguous | -0.395 | Destabilizing | 0.995 | D | 0.633 | neutral | N | 0.488084369 | None | None | I |
T/S | 0.172 | likely_benign | 0.1753 | benign | -0.81 | Destabilizing | 0.946 | D | 0.483 | neutral | N | 0.520791175 | None | None | I |
T/V | 0.1998 | likely_benign | 0.1956 | benign | -0.363 | Destabilizing | 0.702 | D | 0.497 | neutral | None | None | None | None | I |
T/W | 0.8124 | likely_pathogenic | 0.7684 | pathogenic | -0.795 | Destabilizing | 0.999 | D | 0.747 | deleterious | None | None | None | None | I |
T/Y | 0.576 | likely_pathogenic | 0.5391 | ambiguous | -0.571 | Destabilizing | 0.952 | D | 0.693 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.