Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17808 | 53647;53648;53649 | chr2:178607180;178607179;178607178 | chr2:179471907;179471906;179471905 |
N2AB | 16167 | 48724;48725;48726 | chr2:178607180;178607179;178607178 | chr2:179471907;179471906;179471905 |
N2A | 15240 | 45943;45944;45945 | chr2:178607180;178607179;178607178 | chr2:179471907;179471906;179471905 |
N2B | 8743 | 26452;26453;26454 | chr2:178607180;178607179;178607178 | chr2:179471907;179471906;179471905 |
Novex-1 | 8868 | 26827;26828;26829 | chr2:178607180;178607179;178607178 | chr2:179471907;179471906;179471905 |
Novex-2 | 8935 | 27028;27029;27030 | chr2:178607180;178607179;178607178 | chr2:179471907;179471906;179471905 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/I | rs1018984134 | None | 0.454 | N | 0.303 | 0.226 | 0.436025050644 | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 4.78927E-04 |
M/I | rs1018984134 | None | 0.454 | N | 0.303 | 0.226 | 0.436025050644 | gnomAD-4.0.0 | 3.0998E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.39189E-06 | 0 | 1.60174E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/A | 0.6687 | likely_pathogenic | 0.6742 | pathogenic | -1.095 | Destabilizing | 0.007 | N | 0.144 | neutral | None | None | None | None | N |
M/C | 0.7817 | likely_pathogenic | 0.8558 | pathogenic | -0.333 | Destabilizing | 0.991 | D | 0.31 | neutral | None | None | None | None | N |
M/D | 0.9392 | likely_pathogenic | 0.9551 | pathogenic | -0.13 | Destabilizing | 0.974 | D | 0.442 | neutral | None | None | None | None | N |
M/E | 0.8415 | likely_pathogenic | 0.8537 | pathogenic | -0.181 | Destabilizing | 0.842 | D | 0.369 | neutral | None | None | None | None | N |
M/F | 0.4973 | ambiguous | 0.5424 | ambiguous | -0.635 | Destabilizing | 0.949 | D | 0.303 | neutral | None | None | None | None | N |
M/G | 0.773 | likely_pathogenic | 0.7995 | pathogenic | -1.295 | Destabilizing | 0.728 | D | 0.349 | neutral | None | None | None | None | N |
M/H | 0.7112 | likely_pathogenic | 0.7676 | pathogenic | -0.442 | Destabilizing | 0.998 | D | 0.384 | neutral | None | None | None | None | N |
M/I | 0.8019 | likely_pathogenic | 0.8274 | pathogenic | -0.635 | Destabilizing | 0.454 | N | 0.303 | neutral | N | 0.469367322 | None | None | N |
M/K | 0.6667 | likely_pathogenic | 0.6693 | pathogenic | -0.006 | Destabilizing | 0.801 | D | 0.311 | neutral | N | 0.452984528 | None | None | N |
M/L | 0.3186 | likely_benign | 0.3163 | benign | -0.635 | Destabilizing | 0.005 | N | 0.131 | neutral | N | 0.512187548 | None | None | N |
M/N | 0.6138 | likely_pathogenic | 0.6665 | pathogenic | 0.302 | Stabilizing | 0.974 | D | 0.421 | neutral | None | None | None | None | N |
M/P | 0.9742 | likely_pathogenic | 0.9798 | pathogenic | -0.762 | Destabilizing | 0.974 | D | 0.397 | neutral | None | None | None | None | N |
M/Q | 0.4363 | ambiguous | 0.4589 | ambiguous | 0.095 | Stabilizing | 0.974 | D | 0.313 | neutral | None | None | None | None | N |
M/R | 0.6548 | likely_pathogenic | 0.6458 | pathogenic | 0.564 | Stabilizing | 0.966 | D | 0.338 | neutral | N | 0.395477807 | None | None | N |
M/S | 0.5693 | likely_pathogenic | 0.6131 | pathogenic | -0.177 | Destabilizing | 0.728 | D | 0.274 | neutral | None | None | None | None | N |
M/T | 0.5644 | likely_pathogenic | 0.6222 | pathogenic | -0.134 | Destabilizing | 0.801 | D | 0.294 | neutral | N | 0.414370212 | None | None | N |
M/V | 0.3658 | ambiguous | 0.3725 | ambiguous | -0.762 | Destabilizing | 0.454 | N | 0.282 | neutral | N | 0.46431903 | None | None | N |
M/W | 0.7956 | likely_pathogenic | 0.8446 | pathogenic | -0.535 | Destabilizing | 0.998 | D | 0.335 | neutral | None | None | None | None | N |
M/Y | 0.6649 | likely_pathogenic | 0.729 | pathogenic | -0.489 | Destabilizing | 0.991 | D | 0.347 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.