Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17825 | 53698;53699;53700 | chr2:178607129;178607128;178607127 | chr2:179471856;179471855;179471854 |
N2AB | 16184 | 48775;48776;48777 | chr2:178607129;178607128;178607127 | chr2:179471856;179471855;179471854 |
N2A | 15257 | 45994;45995;45996 | chr2:178607129;178607128;178607127 | chr2:179471856;179471855;179471854 |
N2B | 8760 | 26503;26504;26505 | chr2:178607129;178607128;178607127 | chr2:179471856;179471855;179471854 |
Novex-1 | 8885 | 26878;26879;26880 | chr2:178607129;178607128;178607127 | chr2:179471856;179471855;179471854 |
Novex-2 | 8952 | 27079;27080;27081 | chr2:178607129;178607128;178607127 | chr2:179471856;179471855;179471854 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs2055078355 | None | 0.454 | N | 0.346 | 0.21 | 0.463843524616 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1503 | likely_benign | 0.2042 | benign | -0.6 | Destabilizing | 0.454 | N | 0.324 | neutral | N | 0.48190585 | None | None | N |
T/C | 0.5657 | likely_pathogenic | 0.6636 | pathogenic | -0.377 | Destabilizing | 0.998 | D | 0.419 | neutral | None | None | None | None | N |
T/D | 0.8032 | likely_pathogenic | 0.8593 | pathogenic | 0.241 | Stabilizing | 0.915 | D | 0.387 | neutral | None | None | None | None | N |
T/E | 0.692 | likely_pathogenic | 0.7549 | pathogenic | 0.212 | Stabilizing | 0.728 | D | 0.348 | neutral | None | None | None | None | N |
T/F | 0.5525 | ambiguous | 0.6304 | pathogenic | -0.85 | Destabilizing | 0.974 | D | 0.49 | neutral | None | None | None | None | N |
T/G | 0.3866 | ambiguous | 0.4766 | ambiguous | -0.806 | Destabilizing | 0.915 | D | 0.445 | neutral | None | None | None | None | N |
T/H | 0.5271 | ambiguous | 0.6517 | pathogenic | -1.005 | Destabilizing | 0.993 | D | 0.469 | neutral | None | None | None | None | N |
T/I | 0.3198 | likely_benign | 0.4087 | ambiguous | -0.16 | Destabilizing | 0.454 | N | 0.346 | neutral | N | 0.476425348 | None | None | N |
T/K | 0.4994 | ambiguous | 0.6259 | pathogenic | -0.508 | Destabilizing | 0.669 | D | 0.383 | neutral | N | 0.488660114 | None | None | N |
T/L | 0.1704 | likely_benign | 0.2523 | benign | -0.16 | Destabilizing | 0.525 | D | 0.385 | neutral | None | None | None | None | N |
T/M | 0.1638 | likely_benign | 0.2051 | benign | -0.023 | Destabilizing | 0.974 | D | 0.424 | neutral | None | None | None | None | N |
T/N | 0.2848 | likely_benign | 0.3897 | ambiguous | -0.394 | Destabilizing | 0.974 | D | 0.353 | neutral | None | None | None | None | N |
T/P | 0.1639 | likely_benign | 0.2736 | benign | -0.275 | Destabilizing | 0.989 | D | 0.416 | neutral | N | 0.511979691 | None | None | N |
T/Q | 0.4163 | ambiguous | 0.5257 | ambiguous | -0.539 | Destabilizing | 0.325 | N | 0.253 | neutral | None | None | None | None | N |
T/R | 0.454 | ambiguous | 0.5734 | pathogenic | -0.259 | Destabilizing | 0.934 | D | 0.415 | neutral | N | 0.511632974 | None | None | N |
T/S | 0.2055 | likely_benign | 0.2713 | benign | -0.678 | Destabilizing | 0.801 | D | 0.297 | neutral | N | 0.477018968 | None | None | N |
T/V | 0.1975 | likely_benign | 0.246 | benign | -0.275 | Destabilizing | 0.007 | N | 0.125 | neutral | None | None | None | None | N |
T/W | 0.8177 | likely_pathogenic | 0.876 | pathogenic | -0.82 | Destabilizing | 0.998 | D | 0.522 | neutral | None | None | None | None | N |
T/Y | 0.5821 | likely_pathogenic | 0.6904 | pathogenic | -0.564 | Destabilizing | 0.991 | D | 0.489 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.