Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17832 | 53719;53720;53721 | chr2:178607108;178607107;178607106 | chr2:179471835;179471834;179471833 |
N2AB | 16191 | 48796;48797;48798 | chr2:178607108;178607107;178607106 | chr2:179471835;179471834;179471833 |
N2A | 15264 | 46015;46016;46017 | chr2:178607108;178607107;178607106 | chr2:179471835;179471834;179471833 |
N2B | 8767 | 26524;26525;26526 | chr2:178607108;178607107;178607106 | chr2:179471835;179471834;179471833 |
Novex-1 | 8892 | 26899;26900;26901 | chr2:178607108;178607107;178607106 | chr2:179471835;179471834;179471833 |
Novex-2 | 8959 | 27100;27101;27102 | chr2:178607108;178607107;178607106 | chr2:179471835;179471834;179471833 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | None | None | 0.998 | N | 0.63 | 0.516 | 0.406945738958 | gnomAD-4.0.0 | 2.05392E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.51963E-05 | 0 | 3.31565E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2715 | likely_benign | 0.3079 | benign | -0.966 | Destabilizing | 0.998 | D | 0.63 | neutral | N | 0.472080028 | None | None | N |
E/C | 0.9023 | likely_pathogenic | 0.926 | pathogenic | -0.626 | Destabilizing | 1.0 | D | 0.758 | deleterious | None | None | None | None | N |
E/D | 0.4383 | ambiguous | 0.5392 | ambiguous | -1.252 | Destabilizing | 0.434 | N | 0.211 | neutral | N | 0.469433455 | None | None | N |
E/F | 0.9124 | likely_pathogenic | 0.9334 | pathogenic | -0.295 | Destabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | N |
E/G | 0.4731 | ambiguous | 0.5278 | ambiguous | -1.373 | Destabilizing | 0.999 | D | 0.721 | prob.delet. | N | 0.494565602 | None | None | N |
E/H | 0.8076 | likely_pathogenic | 0.8595 | pathogenic | -0.668 | Destabilizing | 1.0 | D | 0.703 | prob.neutral | None | None | None | None | N |
E/I | 0.5227 | ambiguous | 0.6013 | pathogenic | 0.164 | Stabilizing | 1.0 | D | 0.798 | deleterious | None | None | None | None | N |
E/K | 0.4957 | ambiguous | 0.5918 | pathogenic | -1.072 | Destabilizing | 0.998 | D | 0.55 | neutral | N | 0.518153515 | None | None | N |
E/L | 0.6255 | likely_pathogenic | 0.6962 | pathogenic | 0.164 | Stabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
E/M | 0.6092 | likely_pathogenic | 0.6828 | pathogenic | 0.693 | Stabilizing | 1.0 | D | 0.746 | deleterious | None | None | None | None | N |
E/N | 0.5972 | likely_pathogenic | 0.6736 | pathogenic | -1.501 | Destabilizing | 0.999 | D | 0.718 | prob.delet. | None | None | None | None | N |
E/P | 0.6701 | likely_pathogenic | 0.7244 | pathogenic | -0.192 | Destabilizing | 1.0 | D | 0.788 | deleterious | None | None | None | None | N |
E/Q | 0.277 | likely_benign | 0.3239 | benign | -1.312 | Destabilizing | 0.999 | D | 0.665 | neutral | D | 0.524772843 | None | None | N |
E/R | 0.6438 | likely_pathogenic | 0.7245 | pathogenic | -0.776 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | N |
E/S | 0.4466 | ambiguous | 0.5033 | ambiguous | -1.902 | Destabilizing | 0.997 | D | 0.6 | neutral | None | None | None | None | N |
E/T | 0.4044 | ambiguous | 0.4737 | ambiguous | -1.564 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | N |
E/V | 0.3364 | likely_benign | 0.4073 | ambiguous | -0.192 | Destabilizing | 1.0 | D | 0.785 | deleterious | N | 0.481487777 | None | None | N |
E/W | 0.9715 | likely_pathogenic | 0.9802 | pathogenic | -0.086 | Destabilizing | 1.0 | D | 0.77 | deleterious | None | None | None | None | N |
E/Y | 0.848 | likely_pathogenic | 0.8829 | pathogenic | -0.073 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.