Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17895 | 53908;53909;53910 | chr2:178605612;178605611;178605610 | chr2:179470339;179470338;179470337 |
N2AB | 16254 | 48985;48986;48987 | chr2:178605612;178605611;178605610 | chr2:179470339;179470338;179470337 |
N2A | 15327 | 46204;46205;46206 | chr2:178605612;178605611;178605610 | chr2:179470339;179470338;179470337 |
N2B | 8830 | 26713;26714;26715 | chr2:178605612;178605611;178605610 | chr2:179470339;179470338;179470337 |
Novex-1 | 8955 | 27088;27089;27090 | chr2:178605612;178605611;178605610 | chr2:179470339;179470338;179470337 |
Novex-2 | 9022 | 27289;27290;27291 | chr2:178605612;178605611;178605610 | chr2:179470339;179470338;179470337 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/E | rs796463261 | None | 0.025 | N | 0.202 | 0.085 | 0.15556083564 | gnomAD-3.1.2 | 6.61E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
Q/E | rs796463261 | None | 0.025 | N | 0.202 | 0.085 | 0.15556083564 | gnomAD-4.0.0 | 1.32022E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.94863E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.1539 | likely_benign | 0.1301 | benign | -0.28 | Destabilizing | 0.015 | N | 0.177 | neutral | None | None | None | None | I |
Q/C | 0.4057 | ambiguous | 0.3476 | ambiguous | 0.107 | Stabilizing | 0.781 | D | 0.279 | neutral | None | None | None | None | I |
Q/D | 0.4204 | ambiguous | 0.3328 | benign | 0.095 | Stabilizing | 0.064 | N | 0.227 | neutral | None | None | None | None | I |
Q/E | 0.0925 | likely_benign | 0.0853 | benign | 0.109 | Stabilizing | 0.025 | N | 0.202 | neutral | N | 0.442596963 | None | None | I |
Q/F | 0.4835 | ambiguous | 0.3949 | ambiguous | -0.284 | Destabilizing | 0.142 | N | 0.423 | neutral | None | None | None | None | I |
Q/G | 0.3141 | likely_benign | 0.2342 | benign | -0.524 | Destabilizing | 0.064 | N | 0.251 | neutral | None | None | None | None | I |
Q/H | 0.1656 | likely_benign | 0.1294 | benign | -0.281 | Destabilizing | 0.47 | N | 0.267 | neutral | N | 0.497490241 | None | None | I |
Q/I | 0.1638 | likely_benign | 0.1362 | benign | 0.287 | Stabilizing | None | N | 0.143 | neutral | None | None | None | None | I |
Q/K | 0.0722 | likely_benign | 0.0626 | benign | -0.046 | Destabilizing | None | N | 0.077 | neutral | N | 0.43846058 | None | None | I |
Q/L | 0.0656 | likely_benign | 0.0549 | benign | 0.287 | Stabilizing | None | N | 0.113 | neutral | N | 0.414332927 | None | None | I |
Q/M | 0.2029 | likely_benign | 0.177 | benign | 0.412 | Stabilizing | 0.367 | N | 0.299 | neutral | None | None | None | None | I |
Q/N | 0.2613 | likely_benign | 0.1991 | benign | -0.395 | Destabilizing | 0.142 | N | 0.239 | neutral | None | None | None | None | I |
Q/P | 0.6601 | likely_pathogenic | 0.4455 | ambiguous | 0.128 | Stabilizing | 0.202 | N | 0.358 | neutral | N | 0.472293837 | None | None | I |
Q/R | 0.0819 | likely_benign | 0.0705 | benign | 0.11 | Stabilizing | 0.025 | N | 0.235 | neutral | N | 0.427224866 | None | None | I |
Q/S | 0.189 | likely_benign | 0.1462 | benign | -0.437 | Destabilizing | 0.015 | N | 0.177 | neutral | None | None | None | None | I |
Q/T | 0.1059 | likely_benign | 0.0884 | benign | -0.255 | Destabilizing | 0.001 | N | 0.118 | neutral | None | None | None | None | I |
Q/V | 0.1228 | likely_benign | 0.1074 | benign | 0.128 | Stabilizing | 0.006 | N | 0.19 | neutral | None | None | None | None | I |
Q/W | 0.45 | ambiguous | 0.3624 | ambiguous | -0.241 | Destabilizing | 0.931 | D | 0.252 | neutral | None | None | None | None | I |
Q/Y | 0.3541 | ambiguous | 0.2881 | benign | -0.007 | Destabilizing | 0.251 | N | 0.373 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.