Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17904 | 53935;53936;53937 | chr2:178605585;178605584;178605583 | chr2:179470312;179470311;179470310 |
N2AB | 16263 | 49012;49013;49014 | chr2:178605585;178605584;178605583 | chr2:179470312;179470311;179470310 |
N2A | 15336 | 46231;46232;46233 | chr2:178605585;178605584;178605583 | chr2:179470312;179470311;179470310 |
N2B | 8839 | 26740;26741;26742 | chr2:178605585;178605584;178605583 | chr2:179470312;179470311;179470310 |
Novex-1 | 8964 | 27115;27116;27117 | chr2:178605585;178605584;178605583 | chr2:179470312;179470311;179470310 |
Novex-2 | 9031 | 27316;27317;27318 | chr2:178605585;178605584;178605583 | chr2:179470312;179470311;179470310 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/Q | rs2054588188 | None | 0.016 | N | 0.127 | 0.163 | 0.0297737177859 | gnomAD-4.0.0 | 1.59435E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.03049E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.3953 | ambiguous | 0.4342 | ambiguous | 0.535 | Stabilizing | 0.345 | N | 0.477 | neutral | None | None | None | None | N |
H/C | 0.3653 | ambiguous | 0.3844 | ambiguous | 1.274 | Stabilizing | 0.991 | D | 0.496 | neutral | None | None | None | None | N |
H/D | 0.5128 | ambiguous | 0.5867 | pathogenic | 0.232 | Stabilizing | 0.491 | N | 0.407 | neutral | N | 0.391898784 | None | None | N |
H/E | 0.4916 | ambiguous | 0.5559 | ambiguous | 0.259 | Stabilizing | 0.209 | N | 0.272 | neutral | None | None | None | None | N |
H/F | 0.3606 | ambiguous | 0.4306 | ambiguous | 1.088 | Stabilizing | 0.818 | D | 0.46 | neutral | None | None | None | None | N |
H/G | 0.4812 | ambiguous | 0.528 | ambiguous | 0.232 | Stabilizing | 0.722 | D | 0.484 | neutral | None | None | None | None | N |
H/I | 0.4198 | ambiguous | 0.5017 | ambiguous | 1.309 | Stabilizing | 0.39 | N | 0.548 | neutral | None | None | None | None | N |
H/K | 0.3663 | ambiguous | 0.3928 | ambiguous | 0.643 | Stabilizing | 0.209 | N | 0.419 | neutral | None | None | None | None | N |
H/L | 0.1814 | likely_benign | 0.2321 | benign | 1.309 | Stabilizing | 0.001 | N | 0.296 | neutral | N | 0.372504947 | None | None | N |
H/M | 0.4908 | ambiguous | 0.5344 | ambiguous | 1.136 | Stabilizing | 0.818 | D | 0.503 | neutral | None | None | None | None | N |
H/N | 0.1791 | likely_benign | 0.2141 | benign | 0.823 | Stabilizing | 0.662 | D | 0.268 | neutral | N | 0.382607297 | None | None | N |
H/P | 0.2943 | likely_benign | 0.3025 | benign | 1.078 | Stabilizing | 0.001 | N | 0.285 | neutral | N | 0.384050092 | None | None | N |
H/Q | 0.2507 | likely_benign | 0.292 | benign | 0.926 | Stabilizing | 0.016 | N | 0.127 | neutral | N | 0.36665641 | None | None | N |
H/R | 0.2045 | likely_benign | 0.2382 | benign | -0.079 | Destabilizing | 0.491 | N | 0.249 | neutral | N | 0.41054326 | None | None | N |
H/S | 0.3664 | ambiguous | 0.4085 | ambiguous | 0.965 | Stabilizing | 0.345 | N | 0.417 | neutral | None | None | None | None | N |
H/T | 0.4403 | ambiguous | 0.4896 | ambiguous | 1.086 | Stabilizing | 0.561 | D | 0.489 | neutral | None | None | None | None | N |
H/V | 0.3737 | ambiguous | 0.4326 | ambiguous | 1.078 | Stabilizing | 0.39 | N | 0.507 | neutral | None | None | None | None | N |
H/W | 0.4455 | ambiguous | 0.5008 | ambiguous | 1.02 | Stabilizing | 0.991 | D | 0.495 | neutral | None | None | None | None | N |
H/Y | 0.1523 | likely_benign | 0.1881 | benign | 1.379 | Stabilizing | 0.662 | D | 0.344 | neutral | N | 0.433593478 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.