Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17908 | 53947;53948;53949 | chr2:178605573;178605572;178605571 | chr2:179470300;179470299;179470298 |
N2AB | 16267 | 49024;49025;49026 | chr2:178605573;178605572;178605571 | chr2:179470300;179470299;179470298 |
N2A | 15340 | 46243;46244;46245 | chr2:178605573;178605572;178605571 | chr2:179470300;179470299;179470298 |
N2B | 8843 | 26752;26753;26754 | chr2:178605573;178605572;178605571 | chr2:179470300;179470299;179470298 |
Novex-1 | 8968 | 27127;27128;27129 | chr2:178605573;178605572;178605571 | chr2:179470300;179470299;179470298 |
Novex-2 | 9035 | 27328;27329;27330 | chr2:178605573;178605572;178605571 | chr2:179470300;179470299;179470298 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/N | rs778472800 | -0.519 | 0.004 | N | 0.175 | 0.107 | 0.202949470691 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.59E-05 | None | 0 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.0833 | likely_benign | 0.0785 | benign | -0.272 | Destabilizing | 0.007 | N | 0.183 | neutral | N | 0.454566183 | None | None | N |
D/C | 0.3803 | ambiguous | 0.3627 | ambiguous | -0.3 | Destabilizing | 0.992 | D | 0.323 | neutral | None | None | None | None | N |
D/E | 0.0837 | likely_benign | 0.0902 | benign | -0.379 | Destabilizing | 0.002 | N | 0.139 | neutral | N | 0.40858039 | None | None | N |
D/F | 0.3186 | likely_benign | 0.2969 | benign | -0.053 | Destabilizing | 0.972 | D | 0.318 | neutral | None | None | None | None | N |
D/G | 0.1173 | likely_benign | 0.1155 | benign | -0.474 | Destabilizing | 0.201 | N | 0.283 | neutral | N | 0.452179239 | None | None | N |
D/H | 0.1599 | likely_benign | 0.154 | benign | 0.343 | Stabilizing | 0.81 | D | 0.253 | neutral | N | 0.477251042 | None | None | N |
D/I | 0.1426 | likely_benign | 0.1235 | benign | 0.218 | Stabilizing | 0.92 | D | 0.345 | neutral | None | None | None | None | N |
D/K | 0.2075 | likely_benign | 0.2076 | benign | 0.154 | Stabilizing | 0.021 | N | 0.209 | neutral | None | None | None | None | N |
D/L | 0.1862 | likely_benign | 0.1672 | benign | 0.218 | Stabilizing | 0.617 | D | 0.331 | neutral | None | None | None | None | N |
D/M | 0.2914 | likely_benign | 0.2909 | benign | 0.109 | Stabilizing | 0.992 | D | 0.311 | neutral | None | None | None | None | N |
D/N | 0.0714 | likely_benign | 0.0663 | benign | -0.272 | Destabilizing | 0.004 | N | 0.175 | neutral | N | 0.473690662 | None | None | N |
D/P | 0.5213 | ambiguous | 0.5141 | ambiguous | 0.076 | Stabilizing | 0.92 | D | 0.305 | neutral | None | None | None | None | N |
D/Q | 0.1574 | likely_benign | 0.1647 | benign | -0.219 | Destabilizing | 0.447 | N | 0.227 | neutral | None | None | None | None | N |
D/R | 0.2456 | likely_benign | 0.2528 | benign | 0.497 | Stabilizing | 0.447 | N | 0.303 | neutral | None | None | None | None | N |
D/S | 0.0801 | likely_benign | 0.0799 | benign | -0.366 | Destabilizing | 0.25 | N | 0.24 | neutral | None | None | None | None | N |
D/T | 0.1034 | likely_benign | 0.1022 | benign | -0.202 | Destabilizing | 0.617 | D | 0.264 | neutral | None | None | None | None | N |
D/V | 0.0961 | likely_benign | 0.0828 | benign | 0.076 | Stabilizing | 0.549 | D | 0.326 | neutral | N | 0.469170276 | None | None | N |
D/W | 0.7252 | likely_pathogenic | 0.7252 | pathogenic | 0.107 | Stabilizing | 0.992 | D | 0.417 | neutral | None | None | None | None | N |
D/Y | 0.1707 | likely_benign | 0.1529 | benign | 0.187 | Stabilizing | 0.963 | D | 0.318 | neutral | N | 0.521137892 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.