Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17925 | 53998;53999;54000 | chr2:178605522;178605521;178605520 | chr2:179470249;179470248;179470247 |
N2AB | 16284 | 49075;49076;49077 | chr2:178605522;178605521;178605520 | chr2:179470249;179470248;179470247 |
N2A | 15357 | 46294;46295;46296 | chr2:178605522;178605521;178605520 | chr2:179470249;179470248;179470247 |
N2B | 8860 | 26803;26804;26805 | chr2:178605522;178605521;178605520 | chr2:179470249;179470248;179470247 |
Novex-1 | 8985 | 27178;27179;27180 | chr2:178605522;178605521;178605520 | chr2:179470249;179470248;179470247 |
Novex-2 | 9052 | 27379;27380;27381 | chr2:178605522;178605521;178605520 | chr2:179470249;179470248;179470247 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | rs1488258025 | -0.443 | 0.22 | N | 0.602 | 0.239 | 0.267299060538 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/A | rs1488258025 | -0.443 | 0.22 | N | 0.602 | 0.239 | 0.267299060538 | gnomAD-4.0.0 | 6.57903E-06 | None | None | None | None | N | None | 2.41324E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.18 | likely_benign | 0.1763 | benign | -0.48 | Destabilizing | 0.22 | N | 0.602 | neutral | N | 0.502858775 | None | None | N |
E/C | 0.808 | likely_pathogenic | 0.7813 | pathogenic | -0.195 | Destabilizing | 0.968 | D | 0.701 | prob.neutral | None | None | None | None | N |
E/D | 0.0921 | likely_benign | 0.0688 | benign | -0.482 | Destabilizing | None | N | 0.22 | neutral | N | 0.451507235 | None | None | N |
E/F | 0.8128 | likely_pathogenic | 0.8189 | pathogenic | -0.104 | Destabilizing | 0.89 | D | 0.705 | prob.neutral | None | None | None | None | N |
E/G | 0.1538 | likely_benign | 0.1558 | benign | -0.725 | Destabilizing | 0.22 | N | 0.598 | neutral | N | 0.49431665 | None | None | N |
E/H | 0.4317 | ambiguous | 0.4129 | ambiguous | 0.136 | Stabilizing | 0.726 | D | 0.617 | neutral | None | None | None | None | N |
E/I | 0.5294 | ambiguous | 0.4979 | ambiguous | 0.148 | Stabilizing | 0.726 | D | 0.721 | prob.delet. | None | None | None | None | N |
E/K | 0.1756 | likely_benign | 0.1907 | benign | 0.274 | Stabilizing | 0.22 | N | 0.589 | neutral | N | 0.461953515 | None | None | N |
E/L | 0.4798 | ambiguous | 0.4872 | ambiguous | 0.148 | Stabilizing | 0.726 | D | 0.684 | prob.neutral | None | None | None | None | N |
E/M | 0.5512 | ambiguous | 0.5625 | ambiguous | 0.217 | Stabilizing | 0.968 | D | 0.699 | prob.neutral | None | None | None | None | N |
E/N | 0.2065 | likely_benign | 0.1607 | benign | -0.286 | Destabilizing | 0.157 | N | 0.571 | neutral | None | None | None | None | N |
E/P | 0.3862 | ambiguous | 0.3321 | benign | -0.04 | Destabilizing | 0.726 | D | 0.673 | neutral | None | None | None | None | N |
E/Q | 0.1498 | likely_benign | 0.1603 | benign | -0.206 | Destabilizing | 0.22 | N | 0.578 | neutral | N | 0.484926376 | None | None | N |
E/R | 0.281 | likely_benign | 0.3062 | benign | 0.564 | Stabilizing | 0.567 | D | 0.615 | neutral | None | None | None | None | N |
E/S | 0.1789 | likely_benign | 0.1572 | benign | -0.428 | Destabilizing | 0.157 | N | 0.575 | neutral | None | None | None | None | N |
E/T | 0.1973 | likely_benign | 0.1825 | benign | -0.216 | Destabilizing | 0.272 | N | 0.625 | neutral | None | None | None | None | N |
E/V | 0.3036 | likely_benign | 0.2966 | benign | -0.04 | Destabilizing | 0.667 | D | 0.653 | neutral | N | 0.491815062 | None | None | N |
E/W | 0.8837 | likely_pathogenic | 0.88 | pathogenic | 0.138 | Stabilizing | 0.968 | D | 0.683 | prob.neutral | None | None | None | None | N |
E/Y | 0.6524 | likely_pathogenic | 0.6262 | pathogenic | 0.167 | Stabilizing | 0.89 | D | 0.705 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.