Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17932 | 54019;54020;54021 | chr2:178605501;178605500;178605499 | chr2:179470228;179470227;179470226 |
N2AB | 16291 | 49096;49097;49098 | chr2:178605501;178605500;178605499 | chr2:179470228;179470227;179470226 |
N2A | 15364 | 46315;46316;46317 | chr2:178605501;178605500;178605499 | chr2:179470228;179470227;179470226 |
N2B | 8867 | 26824;26825;26826 | chr2:178605501;178605500;178605499 | chr2:179470228;179470227;179470226 |
Novex-1 | 8992 | 27199;27200;27201 | chr2:178605501;178605500;178605499 | chr2:179470228;179470227;179470226 |
Novex-2 | 9059 | 27400;27401;27402 | chr2:178605501;178605500;178605499 | chr2:179470228;179470227;179470226 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/I | rs1195735577 | None | 0.993 | N | 0.397 | 0.359 | 0.472504041403 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
M/T | None | None | 0.979 | N | 0.383 | 0.263 | 0.7014751448 | gnomAD-4.0.0 | 6.8479E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.00101E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/A | 0.8664 | likely_pathogenic | 0.836 | pathogenic | -2.672 | Highly Destabilizing | 0.927 | D | 0.368 | neutral | None | None | None | None | N |
M/C | 0.9206 | likely_pathogenic | 0.8894 | pathogenic | -1.743 | Destabilizing | 1.0 | D | 0.492 | neutral | None | None | None | None | N |
M/D | 0.9525 | likely_pathogenic | 0.9521 | pathogenic | -1.64 | Destabilizing | 0.995 | D | 0.538 | neutral | None | None | None | None | N |
M/E | 0.8709 | likely_pathogenic | 0.821 | pathogenic | -1.519 | Destabilizing | 0.969 | D | 0.461 | neutral | None | None | None | None | N |
M/F | 0.653 | likely_pathogenic | 0.6305 | pathogenic | -1.265 | Destabilizing | 0.999 | D | 0.462 | neutral | None | None | None | None | N |
M/G | 0.9311 | likely_pathogenic | 0.919 | pathogenic | -3.068 | Highly Destabilizing | 0.984 | D | 0.517 | neutral | None | None | None | None | N |
M/H | 0.8716 | likely_pathogenic | 0.8354 | pathogenic | -2.234 | Highly Destabilizing | 1.0 | D | 0.541 | neutral | None | None | None | None | N |
M/I | 0.8312 | likely_pathogenic | 0.7932 | pathogenic | -1.568 | Destabilizing | 0.993 | D | 0.397 | neutral | N | 0.454699469 | None | None | N |
M/K | 0.7542 | likely_pathogenic | 0.7042 | pathogenic | -1.505 | Destabilizing | 0.238 | N | 0.233 | neutral | N | 0.421200184 | None | None | N |
M/L | 0.31 | likely_benign | 0.3174 | benign | -1.568 | Destabilizing | 0.895 | D | 0.217 | neutral | N | 0.447637424 | None | None | N |
M/N | 0.7841 | likely_pathogenic | 0.7429 | pathogenic | -1.496 | Destabilizing | 0.995 | D | 0.523 | neutral | None | None | None | None | N |
M/P | 0.9403 | likely_pathogenic | 0.9266 | pathogenic | -1.916 | Destabilizing | 0.999 | D | 0.527 | neutral | None | None | None | None | N |
M/Q | 0.625 | likely_pathogenic | 0.5511 | ambiguous | -1.438 | Destabilizing | 0.969 | D | 0.437 | neutral | None | None | None | None | N |
M/R | 0.7653 | likely_pathogenic | 0.7257 | pathogenic | -1.113 | Destabilizing | 0.921 | D | 0.429 | neutral | N | 0.431033176 | None | None | N |
M/S | 0.8367 | likely_pathogenic | 0.801 | pathogenic | -2.137 | Highly Destabilizing | 0.969 | D | 0.389 | neutral | None | None | None | None | N |
M/T | 0.7558 | likely_pathogenic | 0.6889 | pathogenic | -1.909 | Destabilizing | 0.979 | D | 0.383 | neutral | N | 0.409772469 | None | None | N |
M/V | 0.3933 | ambiguous | 0.3338 | benign | -1.916 | Destabilizing | 0.951 | D | 0.418 | neutral | N | 0.427051508 | None | None | N |
M/W | 0.8801 | likely_pathogenic | 0.8777 | pathogenic | -1.32 | Destabilizing | 1.0 | D | 0.511 | neutral | None | None | None | None | N |
M/Y | 0.8301 | likely_pathogenic | 0.8023 | pathogenic | -1.443 | Destabilizing | 0.999 | D | 0.508 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.