Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17933 | 54022;54023;54024 | chr2:178605498;178605497;178605496 | chr2:179470225;179470224;179470223 |
N2AB | 16292 | 49099;49100;49101 | chr2:178605498;178605497;178605496 | chr2:179470225;179470224;179470223 |
N2A | 15365 | 46318;46319;46320 | chr2:178605498;178605497;178605496 | chr2:179470225;179470224;179470223 |
N2B | 8868 | 26827;26828;26829 | chr2:178605498;178605497;178605496 | chr2:179470225;179470224;179470223 |
Novex-1 | 8993 | 27202;27203;27204 | chr2:178605498;178605497;178605496 | chr2:179470225;179470224;179470223 |
Novex-2 | 9060 | 27403;27404;27405 | chr2:178605498;178605497;178605496 | chr2:179470225;179470224;179470223 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | rs1271497242 | None | 1.0 | D | 0.866 | 0.853 | 0.916892032025 | gnomAD-4.0.0 | 3.18885E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.86993E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9878 | likely_pathogenic | 0.984 | pathogenic | -3.294 | Highly Destabilizing | 0.998 | D | 0.839 | deleterious | None | None | None | None | N |
Y/C | 0.8729 | likely_pathogenic | 0.8432 | pathogenic | -1.884 | Destabilizing | 1.0 | D | 0.866 | deleterious | D | 0.625109976 | None | None | N |
Y/D | 0.9916 | likely_pathogenic | 0.9913 | pathogenic | -3.81 | Highly Destabilizing | 1.0 | D | 0.882 | deleterious | D | 0.662488485 | None | None | N |
Y/E | 0.9967 | likely_pathogenic | 0.9962 | pathogenic | -3.6 | Highly Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
Y/F | 0.2187 | likely_benign | 0.202 | benign | -1.228 | Destabilizing | 0.434 | N | 0.528 | neutral | D | 0.583361418 | None | None | N |
Y/G | 0.9802 | likely_pathogenic | 0.9779 | pathogenic | -3.704 | Highly Destabilizing | 1.0 | D | 0.876 | deleterious | None | None | None | None | N |
Y/H | 0.9206 | likely_pathogenic | 0.9122 | pathogenic | -2.376 | Highly Destabilizing | 1.0 | D | 0.811 | deleterious | D | 0.64623696 | None | None | N |
Y/I | 0.9628 | likely_pathogenic | 0.9464 | pathogenic | -1.915 | Destabilizing | 0.999 | D | 0.82 | deleterious | None | None | None | None | N |
Y/K | 0.9975 | likely_pathogenic | 0.9968 | pathogenic | -2.392 | Highly Destabilizing | 1.0 | D | 0.872 | deleterious | None | None | None | None | N |
Y/L | 0.9067 | likely_pathogenic | 0.8596 | pathogenic | -1.915 | Destabilizing | 0.994 | D | 0.777 | deleterious | None | None | None | None | N |
Y/M | 0.9631 | likely_pathogenic | 0.9408 | pathogenic | -1.641 | Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
Y/N | 0.9565 | likely_pathogenic | 0.9502 | pathogenic | -3.214 | Highly Destabilizing | 1.0 | D | 0.87 | deleterious | D | 0.662286681 | None | None | N |
Y/P | 0.9987 | likely_pathogenic | 0.9987 | pathogenic | -2.393 | Highly Destabilizing | 1.0 | D | 0.889 | deleterious | None | None | None | None | N |
Y/Q | 0.995 | likely_pathogenic | 0.9933 | pathogenic | -2.959 | Highly Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | N |
Y/R | 0.9907 | likely_pathogenic | 0.9884 | pathogenic | -2.139 | Highly Destabilizing | 1.0 | D | 0.86 | deleterious | None | None | None | None | N |
Y/S | 0.9766 | likely_pathogenic | 0.9706 | pathogenic | -3.506 | Highly Destabilizing | 1.0 | D | 0.868 | deleterious | D | 0.662488485 | None | None | N |
Y/T | 0.9898 | likely_pathogenic | 0.9874 | pathogenic | -3.178 | Highly Destabilizing | 1.0 | D | 0.868 | deleterious | None | None | None | None | N |
Y/V | 0.9175 | likely_pathogenic | 0.8881 | pathogenic | -2.393 | Highly Destabilizing | 0.997 | D | 0.8 | deleterious | None | None | None | None | N |
Y/W | 0.6614 | likely_pathogenic | 0.6454 | pathogenic | -0.538 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.