Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17934 | 54025;54026;54027 | chr2:178605495;178605494;178605493 | chr2:179470222;179470221;179470220 |
N2AB | 16293 | 49102;49103;49104 | chr2:178605495;178605494;178605493 | chr2:179470222;179470221;179470220 |
N2A | 15366 | 46321;46322;46323 | chr2:178605495;178605494;178605493 | chr2:179470222;179470221;179470220 |
N2B | 8869 | 26830;26831;26832 | chr2:178605495;178605494;178605493 | chr2:179470222;179470221;179470220 |
Novex-1 | 8994 | 27205;27206;27207 | chr2:178605495;178605494;178605493 | chr2:179470222;179470221;179470220 |
Novex-2 | 9061 | 27406;27407;27408 | chr2:178605495;178605494;178605493 | chr2:179470222;179470221;179470220 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs774287393 | -2.675 | 0.999 | N | 0.59 | 0.295 | 0.353548585375 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
E/K | rs774287393 | -2.675 | 0.999 | N | 0.59 | 0.295 | 0.353548585375 | gnomAD-4.0.0 | 1.59461E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43526E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.6448 | likely_pathogenic | 0.6814 | pathogenic | -1.414 | Destabilizing | 0.999 | D | 0.732 | prob.delet. | N | 0.471764086 | None | None | N |
E/C | 0.9697 | likely_pathogenic | 0.9725 | pathogenic | -0.775 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | N |
E/D | 0.5482 | ambiguous | 0.7055 | pathogenic | -1.693 | Destabilizing | 0.999 | D | 0.591 | neutral | D | 0.526333068 | None | None | N |
E/F | 0.9766 | likely_pathogenic | 0.984 | pathogenic | -0.988 | Destabilizing | 1.0 | D | 0.854 | deleterious | None | None | None | None | N |
E/G | 0.8322 | likely_pathogenic | 0.856 | pathogenic | -1.833 | Destabilizing | 1.0 | D | 0.777 | deleterious | N | 0.486767696 | None | None | N |
E/H | 0.9342 | likely_pathogenic | 0.9508 | pathogenic | -1.059 | Destabilizing | 1.0 | D | 0.635 | neutral | None | None | None | None | N |
E/I | 0.8396 | likely_pathogenic | 0.8703 | pathogenic | -0.208 | Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
E/K | 0.8944 | likely_pathogenic | 0.9182 | pathogenic | -1.638 | Destabilizing | 0.999 | D | 0.59 | neutral | N | 0.497740957 | None | None | N |
E/L | 0.9069 | likely_pathogenic | 0.9395 | pathogenic | -0.208 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
E/M | 0.8837 | likely_pathogenic | 0.9103 | pathogenic | 0.571 | Stabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
E/N | 0.8622 | likely_pathogenic | 0.9113 | pathogenic | -1.926 | Destabilizing | 1.0 | D | 0.677 | prob.neutral | None | None | None | None | N |
E/P | 0.9972 | likely_pathogenic | 0.9981 | pathogenic | -0.595 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
E/Q | 0.5176 | ambiguous | 0.5296 | ambiguous | -1.585 | Destabilizing | 1.0 | D | 0.684 | prob.neutral | N | 0.462628306 | None | None | N |
E/R | 0.9007 | likely_pathogenic | 0.9211 | pathogenic | -1.476 | Destabilizing | 1.0 | D | 0.676 | prob.neutral | None | None | None | None | N |
E/S | 0.683 | likely_pathogenic | 0.7282 | pathogenic | -2.559 | Highly Destabilizing | 0.999 | D | 0.647 | neutral | None | None | None | None | N |
E/T | 0.7513 | likely_pathogenic | 0.7829 | pathogenic | -2.168 | Highly Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | N |
E/V | 0.7004 | likely_pathogenic | 0.7468 | pathogenic | -0.595 | Destabilizing | 1.0 | D | 0.781 | deleterious | N | 0.518385588 | None | None | N |
E/W | 0.9917 | likely_pathogenic | 0.9953 | pathogenic | -1.083 | Destabilizing | 1.0 | D | 0.814 | deleterious | None | None | None | None | N |
E/Y | 0.9577 | likely_pathogenic | 0.9728 | pathogenic | -0.84 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.