Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17942 | 54049;54050;54051 | chr2:178605471;178605470;178605469 | chr2:179470198;179470197;179470196 |
N2AB | 16301 | 49126;49127;49128 | chr2:178605471;178605470;178605469 | chr2:179470198;179470197;179470196 |
N2A | 15374 | 46345;46346;46347 | chr2:178605471;178605470;178605469 | chr2:179470198;179470197;179470196 |
N2B | 8877 | 26854;26855;26856 | chr2:178605471;178605470;178605469 | chr2:179470198;179470197;179470196 |
Novex-1 | 9002 | 27229;27230;27231 | chr2:178605471;178605470;178605469 | chr2:179470198;179470197;179470196 |
Novex-2 | 9069 | 27430;27431;27432 | chr2:178605471;178605470;178605469 | chr2:179470198;179470197;179470196 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs2054564830 | None | 0.055 | N | 0.317 | 0.138 | 0.232513804876 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 2.42E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs2054564830 | None | 0.055 | N | 0.317 | 0.138 | 0.232513804876 | gnomAD-4.0.0 | 2.48192E-06 | None | None | None | None | I | None | 5.34945E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.0807 | likely_benign | 0.0723 | benign | -0.344 | Destabilizing | None | N | 0.157 | neutral | N | 0.411081978 | None | None | I |
E/C | 0.6598 | likely_pathogenic | 0.574 | pathogenic | -0.09 | Destabilizing | 0.676 | D | 0.449 | neutral | None | None | None | None | I |
E/D | 0.0864 | likely_benign | 0.0887 | benign | -0.306 | Destabilizing | None | N | 0.176 | neutral | N | 0.461068081 | None | None | I |
E/F | 0.6022 | likely_pathogenic | 0.5323 | ambiguous | -0.232 | Destabilizing | 0.214 | N | 0.487 | neutral | None | None | None | None | I |
E/G | 0.129 | likely_benign | 0.0994 | benign | -0.523 | Destabilizing | None | N | 0.204 | neutral | N | 0.485286161 | None | None | I |
E/H | 0.2807 | likely_benign | 0.2601 | benign | 0.092 | Stabilizing | 0.356 | N | 0.333 | neutral | None | None | None | None | I |
E/I | 0.2376 | likely_benign | 0.2065 | benign | 0.089 | Stabilizing | 0.038 | N | 0.555 | neutral | None | None | None | None | I |
E/K | 0.1213 | likely_benign | 0.1056 | benign | 0.356 | Stabilizing | 0.055 | N | 0.317 | neutral | N | 0.455238187 | None | None | I |
E/L | 0.2466 | likely_benign | 0.2083 | benign | 0.089 | Stabilizing | None | N | 0.241 | neutral | None | None | None | None | I |
E/M | 0.3113 | likely_benign | 0.2754 | benign | 0.116 | Stabilizing | 0.214 | N | 0.479 | neutral | None | None | None | None | I |
E/N | 0.1406 | likely_benign | 0.1404 | benign | 0.014 | Stabilizing | 0.038 | N | 0.333 | neutral | None | None | None | None | I |
E/P | 0.4282 | ambiguous | 0.3668 | ambiguous | -0.036 | Destabilizing | 0.214 | N | 0.446 | neutral | None | None | None | None | I |
E/Q | 0.1126 | likely_benign | 0.1034 | benign | 0.05 | Stabilizing | 0.055 | N | 0.322 | neutral | N | 0.479288482 | None | None | I |
E/R | 0.1914 | likely_benign | 0.1609 | benign | 0.569 | Stabilizing | 0.072 | N | 0.329 | neutral | None | None | None | None | I |
E/S | 0.1153 | likely_benign | 0.107 | benign | -0.132 | Destabilizing | 0.016 | N | 0.303 | neutral | None | None | None | None | I |
E/T | 0.1303 | likely_benign | 0.1196 | benign | 0.019 | Stabilizing | 0.038 | N | 0.46 | neutral | None | None | None | None | I |
E/V | 0.1625 | likely_benign | 0.1418 | benign | -0.036 | Destabilizing | 0.012 | N | 0.482 | neutral | N | 0.485022376 | None | None | I |
E/W | 0.8065 | likely_pathogenic | 0.7213 | pathogenic | -0.089 | Destabilizing | 0.864 | D | 0.475 | neutral | None | None | None | None | I |
E/Y | 0.453 | ambiguous | 0.3984 | ambiguous | 0.008 | Stabilizing | 0.356 | N | 0.491 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.