Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17951 | 54076;54077;54078 | chr2:178605444;178605443;178605442 | chr2:179470171;179470170;179470169 |
N2AB | 16310 | 49153;49154;49155 | chr2:178605444;178605443;178605442 | chr2:179470171;179470170;179470169 |
N2A | 15383 | 46372;46373;46374 | chr2:178605444;178605443;178605442 | chr2:179470171;179470170;179470169 |
N2B | 8886 | 26881;26882;26883 | chr2:178605444;178605443;178605442 | chr2:179470171;179470170;179470169 |
Novex-1 | 9011 | 27256;27257;27258 | chr2:178605444;178605443;178605442 | chr2:179470171;179470170;179470169 |
Novex-2 | 9078 | 27457;27458;27459 | chr2:178605444;178605443;178605442 | chr2:179470171;179470170;179470169 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/R | None | None | 0.998 | N | 0.873 | 0.397 | 0.466571191598 | gnomAD-4.0.0 | 1.60174E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.87853E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1897 | likely_benign | 0.1619 | benign | -1.143 | Destabilizing | 0.982 | D | 0.739 | deleterious | N | 0.443172967 | None | None | I |
P/C | 0.7825 | likely_pathogenic | 0.7586 | pathogenic | -0.785 | Destabilizing | 1.0 | D | 0.899 | deleterious | None | None | None | None | I |
P/D | 0.9291 | likely_pathogenic | 0.8948 | pathogenic | -0.758 | Destabilizing | 0.998 | D | 0.806 | deleterious | None | None | None | None | I |
P/E | 0.8354 | likely_pathogenic | 0.7828 | pathogenic | -0.774 | Destabilizing | 0.998 | D | 0.789 | deleterious | None | None | None | None | I |
P/F | 0.8578 | likely_pathogenic | 0.7994 | pathogenic | -0.857 | Destabilizing | 1.0 | D | 0.907 | deleterious | None | None | None | None | I |
P/G | 0.6747 | likely_pathogenic | 0.6323 | pathogenic | -1.426 | Destabilizing | 0.998 | D | 0.781 | deleterious | None | None | None | None | I |
P/H | 0.6906 | likely_pathogenic | 0.6087 | pathogenic | -0.856 | Destabilizing | 1.0 | D | 0.901 | deleterious | N | 0.470519411 | None | None | I |
P/I | 0.6039 | likely_pathogenic | 0.5304 | ambiguous | -0.487 | Destabilizing | 0.996 | D | 0.863 | deleterious | None | None | None | None | I |
P/K | 0.8799 | likely_pathogenic | 0.8286 | pathogenic | -0.975 | Destabilizing | 0.996 | D | 0.795 | deleterious | None | None | None | None | I |
P/L | 0.3373 | likely_benign | 0.2702 | benign | -0.487 | Destabilizing | 0.995 | D | 0.78 | deleterious | N | 0.50370135 | None | None | I |
P/M | 0.6586 | likely_pathogenic | 0.5992 | pathogenic | -0.421 | Destabilizing | 1.0 | D | 0.901 | deleterious | None | None | None | None | I |
P/N | 0.7948 | likely_pathogenic | 0.7362 | pathogenic | -0.789 | Destabilizing | 0.998 | D | 0.832 | deleterious | None | None | None | None | I |
P/Q | 0.6266 | likely_pathogenic | 0.5514 | ambiguous | -0.945 | Destabilizing | 0.999 | D | 0.828 | deleterious | None | None | None | None | I |
P/R | 0.7708 | likely_pathogenic | 0.6943 | pathogenic | -0.449 | Destabilizing | 0.998 | D | 0.873 | deleterious | N | 0.481115247 | None | None | I |
P/S | 0.3903 | ambiguous | 0.3289 | benign | -1.295 | Destabilizing | 0.99 | D | 0.817 | deleterious | N | 0.489849406 | None | None | I |
P/T | 0.321 | likely_benign | 0.2669 | benign | -1.199 | Destabilizing | 0.635 | D | 0.391 | neutral | N | 0.456910268 | None | None | I |
P/V | 0.4217 | ambiguous | 0.3707 | ambiguous | -0.669 | Destabilizing | 0.996 | D | 0.754 | deleterious | None | None | None | None | I |
P/W | 0.9469 | likely_pathogenic | 0.9246 | pathogenic | -1.019 | Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | I |
P/Y | 0.8734 | likely_pathogenic | 0.8298 | pathogenic | -0.724 | Destabilizing | 1.0 | D | 0.902 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.