Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17955 | 54088;54089;54090 | chr2:178605432;178605431;178605430 | chr2:179470159;179470158;179470157 |
N2AB | 16314 | 49165;49166;49167 | chr2:178605432;178605431;178605430 | chr2:179470159;179470158;179470157 |
N2A | 15387 | 46384;46385;46386 | chr2:178605432;178605431;178605430 | chr2:179470159;179470158;179470157 |
N2B | 8890 | 26893;26894;26895 | chr2:178605432;178605431;178605430 | chr2:179470159;179470158;179470157 |
Novex-1 | 9015 | 27268;27269;27270 | chr2:178605432;178605431;178605430 | chr2:179470159;179470158;179470157 |
Novex-2 | 9082 | 27469;27470;27471 | chr2:178605432;178605431;178605430 | chr2:179470159;179470158;179470157 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs747319436 | None | 0.996 | N | 0.552 | 0.179 | 0.583177444714 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 2.07383E-04 | 0 |
V/A | rs747319436 | None | 0.996 | N | 0.552 | 0.179 | 0.583177444714 | gnomAD-4.0.0 | 3.91004E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 4.12394E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.7781 | likely_pathogenic | 0.7919 | pathogenic | -1.37 | Destabilizing | 0.996 | D | 0.552 | neutral | N | 0.46509768 | None | None | N |
V/C | 0.9352 | likely_pathogenic | 0.9409 | pathogenic | -0.87 | Destabilizing | 1.0 | D | 0.824 | deleterious | None | None | None | None | N |
V/D | 0.9427 | likely_pathogenic | 0.9495 | pathogenic | -1.367 | Destabilizing | 1.0 | D | 0.899 | deleterious | N | 0.466111638 | None | None | N |
V/E | 0.8944 | likely_pathogenic | 0.896 | pathogenic | -1.381 | Destabilizing | 1.0 | D | 0.893 | deleterious | None | None | None | None | N |
V/F | 0.6074 | likely_pathogenic | 0.6231 | pathogenic | -1.057 | Destabilizing | 0.999 | D | 0.86 | deleterious | N | 0.465351169 | None | None | N |
V/G | 0.8448 | likely_pathogenic | 0.8509 | pathogenic | -1.671 | Destabilizing | 1.0 | D | 0.899 | deleterious | N | 0.466111638 | None | None | N |
V/H | 0.949 | likely_pathogenic | 0.958 | pathogenic | -1.2 | Destabilizing | 1.0 | D | 0.91 | deleterious | None | None | None | None | N |
V/I | 0.1157 | likely_benign | 0.1308 | benign | -0.651 | Destabilizing | 0.603 | D | 0.231 | neutral | N | 0.463830232 | None | None | N |
V/K | 0.9236 | likely_pathogenic | 0.9247 | pathogenic | -1.298 | Destabilizing | 1.0 | D | 0.907 | deleterious | None | None | None | None | N |
V/L | 0.5883 | likely_pathogenic | 0.6233 | pathogenic | -0.651 | Destabilizing | 0.959 | D | 0.569 | neutral | N | 0.464083722 | None | None | N |
V/M | 0.5175 | ambiguous | 0.5434 | ambiguous | -0.447 | Destabilizing | 0.999 | D | 0.737 | deleterious | None | None | None | None | N |
V/N | 0.8064 | likely_pathogenic | 0.8607 | pathogenic | -1.064 | Destabilizing | 1.0 | D | 0.911 | deleterious | None | None | None | None | N |
V/P | 0.9381 | likely_pathogenic | 0.9338 | pathogenic | -0.856 | Destabilizing | 1.0 | D | 0.904 | deleterious | None | None | None | None | N |
V/Q | 0.8698 | likely_pathogenic | 0.8882 | pathogenic | -1.25 | Destabilizing | 1.0 | D | 0.916 | deleterious | None | None | None | None | N |
V/R | 0.8843 | likely_pathogenic | 0.89 | pathogenic | -0.702 | Destabilizing | 1.0 | D | 0.905 | deleterious | None | None | None | None | N |
V/S | 0.8133 | likely_pathogenic | 0.837 | pathogenic | -1.524 | Destabilizing | 1.0 | D | 0.899 | deleterious | None | None | None | None | N |
V/T | 0.6914 | likely_pathogenic | 0.7131 | pathogenic | -1.435 | Destabilizing | 0.997 | D | 0.593 | neutral | None | None | None | None | N |
V/W | 0.977 | likely_pathogenic | 0.9805 | pathogenic | -1.261 | Destabilizing | 1.0 | D | 0.904 | deleterious | None | None | None | None | N |
V/Y | 0.9024 | likely_pathogenic | 0.9138 | pathogenic | -0.985 | Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.