Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17977 | 54154;54155;54156 | chr2:178605248;178605247;178605246 | chr2:179469975;179469974;179469973 |
N2AB | 16336 | 49231;49232;49233 | chr2:178605248;178605247;178605246 | chr2:179469975;179469974;179469973 |
N2A | 15409 | 46450;46451;46452 | chr2:178605248;178605247;178605246 | chr2:179469975;179469974;179469973 |
N2B | 8912 | 26959;26960;26961 | chr2:178605248;178605247;178605246 | chr2:179469975;179469974;179469973 |
Novex-1 | 9037 | 27334;27335;27336 | chr2:178605248;178605247;178605246 | chr2:179469975;179469974;179469973 |
Novex-2 | 9104 | 27535;27536;27537 | chr2:178605248;178605247;178605246 | chr2:179469975;179469974;179469973 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | None | None | 0.912 | N | 0.351 | 0.255 | 0.239305524855 | gnomAD-4.0.0 | 1.60552E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.87974E-06 | 0 | 0 |
K/Q | None | None | 0.947 | N | 0.385 | 0.254 | 0.263140351381 | gnomAD-4.0.0 | 6.86935E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.01656E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.4743 | ambiguous | 0.5927 | pathogenic | -0.4 | Destabilizing | 0.737 | D | 0.353 | neutral | None | None | None | None | N |
K/C | 0.7405 | likely_pathogenic | 0.8116 | pathogenic | -0.669 | Destabilizing | 0.998 | D | 0.364 | neutral | None | None | None | None | N |
K/D | 0.8445 | likely_pathogenic | 0.8894 | pathogenic | 0.195 | Stabilizing | 0.932 | D | 0.419 | neutral | None | None | None | None | N |
K/E | 0.4396 | ambiguous | 0.4981 | ambiguous | 0.296 | Stabilizing | 0.837 | D | 0.317 | neutral | N | 0.443109543 | None | None | N |
K/F | 0.841 | likely_pathogenic | 0.8866 | pathogenic | -0.221 | Destabilizing | 0.98 | D | 0.404 | neutral | None | None | None | None | N |
K/G | 0.7163 | likely_pathogenic | 0.8066 | pathogenic | -0.705 | Destabilizing | 0.932 | D | 0.392 | neutral | None | None | None | None | N |
K/H | 0.3789 | ambiguous | 0.4429 | ambiguous | -0.742 | Destabilizing | 0.993 | D | 0.382 | neutral | None | None | None | None | N |
K/I | 0.4028 | ambiguous | 0.4705 | ambiguous | 0.366 | Stabilizing | 0.064 | N | 0.234 | neutral | N | 0.411213343 | None | None | N |
K/L | 0.4675 | ambiguous | 0.5256 | ambiguous | 0.366 | Stabilizing | 0.584 | D | 0.348 | neutral | None | None | None | None | N |
K/M | 0.3112 | likely_benign | 0.3647 | ambiguous | -0.057 | Destabilizing | 0.98 | D | 0.379 | neutral | None | None | None | None | N |
K/N | 0.6592 | likely_pathogenic | 0.7412 | pathogenic | -0.329 | Destabilizing | 0.912 | D | 0.351 | neutral | N | 0.462314167 | None | None | N |
K/P | 0.8336 | likely_pathogenic | 0.8842 | pathogenic | 0.14 | Stabilizing | 0.993 | D | 0.421 | neutral | None | None | None | None | N |
K/Q | 0.209 | likely_benign | 0.2501 | benign | -0.338 | Destabilizing | 0.947 | D | 0.385 | neutral | N | 0.460447297 | None | None | N |
K/R | 0.0926 | likely_benign | 0.0952 | benign | -0.238 | Destabilizing | 0.016 | N | 0.196 | neutral | N | 0.423622493 | None | None | N |
K/S | 0.5617 | ambiguous | 0.6895 | pathogenic | -0.955 | Destabilizing | 0.773 | D | 0.296 | neutral | None | None | None | None | N |
K/T | 0.2041 | likely_benign | 0.2651 | benign | -0.655 | Destabilizing | 0.064 | N | 0.195 | neutral | N | 0.419176678 | None | None | N |
K/V | 0.3537 | ambiguous | 0.426 | ambiguous | 0.14 | Stabilizing | 0.037 | N | 0.166 | neutral | None | None | None | None | N |
K/W | 0.8262 | likely_pathogenic | 0.8689 | pathogenic | -0.157 | Destabilizing | 0.998 | D | 0.438 | neutral | None | None | None | None | N |
K/Y | 0.7449 | likely_pathogenic | 0.8075 | pathogenic | 0.148 | Stabilizing | 0.993 | D | 0.38 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.