Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17979 | 54160;54161;54162 | chr2:178605242;178605241;178605240 | chr2:179469969;179469968;179469967 |
N2AB | 16338 | 49237;49238;49239 | chr2:178605242;178605241;178605240 | chr2:179469969;179469968;179469967 |
N2A | 15411 | 46456;46457;46458 | chr2:178605242;178605241;178605240 | chr2:179469969;179469968;179469967 |
N2B | 8914 | 26965;26966;26967 | chr2:178605242;178605241;178605240 | chr2:179469969;179469968;179469967 |
Novex-1 | 9039 | 27340;27341;27342 | chr2:178605242;178605241;178605240 | chr2:179469969;179469968;179469967 |
Novex-2 | 9106 | 27541;27542;27543 | chr2:178605242;178605241;178605240 | chr2:179469969;179469968;179469967 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | None | None | 0.001 | N | 0.289 | 0.054 | 0.267299060538 | gnomAD-4.0.0 | 1.60204E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.44383E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.6022 | likely_pathogenic | 0.5738 | pathogenic | -0.016 | Destabilizing | 0.157 | N | 0.529 | neutral | None | None | None | None | N |
K/C | 0.8072 | likely_pathogenic | 0.8052 | pathogenic | -0.382 | Destabilizing | 0.968 | D | 0.667 | neutral | None | None | None | None | N |
K/D | 0.8882 | likely_pathogenic | 0.8708 | pathogenic | 0.041 | Stabilizing | 0.726 | D | 0.535 | neutral | None | None | None | None | N |
K/E | 0.4867 | ambiguous | 0.437 | ambiguous | 0.07 | Stabilizing | 0.22 | N | 0.497 | neutral | N | 0.499426973 | None | None | N |
K/F | 0.8312 | likely_pathogenic | 0.8378 | pathogenic | -0.11 | Destabilizing | 0.567 | D | 0.639 | neutral | None | None | None | None | N |
K/G | 0.7723 | likely_pathogenic | 0.7602 | pathogenic | -0.24 | Destabilizing | 0.272 | N | 0.58 | neutral | None | None | None | None | N |
K/H | 0.428 | ambiguous | 0.4132 | ambiguous | -0.396 | Destabilizing | 0.968 | D | 0.521 | neutral | None | None | None | None | N |
K/I | 0.5528 | ambiguous | 0.5206 | ambiguous | 0.501 | Stabilizing | 0.396 | N | 0.637 | neutral | None | None | None | None | N |
K/L | 0.4434 | ambiguous | 0.4595 | ambiguous | 0.501 | Stabilizing | 0.06 | N | 0.581 | neutral | None | None | None | None | N |
K/M | 0.3312 | likely_benign | 0.3493 | ambiguous | 0.117 | Stabilizing | 0.009 | N | 0.346 | neutral | N | 0.516706012 | None | None | N |
K/N | 0.7199 | likely_pathogenic | 0.7127 | pathogenic | -0.001 | Destabilizing | 0.667 | D | 0.471 | neutral | N | 0.502101919 | None | None | N |
K/P | 0.7727 | likely_pathogenic | 0.7827 | pathogenic | 0.358 | Stabilizing | 0.89 | D | 0.533 | neutral | None | None | None | None | N |
K/Q | 0.232 | likely_benign | 0.2257 | benign | -0.114 | Destabilizing | 0.497 | N | 0.493 | neutral | N | 0.502312563 | None | None | N |
K/R | 0.0824 | likely_benign | 0.084 | benign | -0.128 | Destabilizing | 0.001 | N | 0.289 | neutral | N | 0.435858284 | None | None | N |
K/S | 0.7548 | likely_pathogenic | 0.7261 | pathogenic | -0.479 | Destabilizing | 0.272 | N | 0.486 | neutral | None | None | None | None | N |
K/T | 0.4422 | ambiguous | 0.3802 | ambiguous | -0.293 | Destabilizing | 0.22 | N | 0.535 | neutral | N | 0.4879219 | None | None | N |
K/V | 0.4891 | ambiguous | 0.4702 | ambiguous | 0.358 | Stabilizing | 0.157 | N | 0.603 | neutral | None | None | None | None | N |
K/W | 0.8283 | likely_pathogenic | 0.8087 | pathogenic | -0.134 | Destabilizing | 0.968 | D | 0.693 | prob.neutral | None | None | None | None | N |
K/Y | 0.7527 | likely_pathogenic | 0.7508 | pathogenic | 0.206 | Stabilizing | 0.726 | D | 0.629 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.