Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17997 | 54214;54215;54216 | chr2:178605188;178605187;178605186 | chr2:179469915;179469914;179469913 |
N2AB | 16356 | 49291;49292;49293 | chr2:178605188;178605187;178605186 | chr2:179469915;179469914;179469913 |
N2A | 15429 | 46510;46511;46512 | chr2:178605188;178605187;178605186 | chr2:179469915;179469914;179469913 |
N2B | 8932 | 27019;27020;27021 | chr2:178605188;178605187;178605186 | chr2:179469915;179469914;179469913 |
Novex-1 | 9057 | 27394;27395;27396 | chr2:178605188;178605187;178605186 | chr2:179469915;179469914;179469913 |
Novex-2 | 9124 | 27595;27596;27597 | chr2:178605188;178605187;178605186 | chr2:179469915;179469914;179469913 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | None | None | 1.0 | N | 0.733 | 0.293 | 0.329282125956 | gnomAD-4.0.0 | 4.78292E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.5888E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2394 | likely_benign | 0.2928 | benign | -0.08 | Destabilizing | 0.999 | D | 0.676 | prob.neutral | None | None | None | None | I |
K/C | 0.6329 | likely_pathogenic | 0.6883 | pathogenic | -0.217 | Destabilizing | 1.0 | D | 0.792 | deleterious | None | None | None | None | I |
K/D | 0.4843 | ambiguous | 0.5222 | ambiguous | 0.156 | Stabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | I |
K/E | 0.1742 | likely_benign | 0.1826 | benign | 0.187 | Stabilizing | 0.999 | D | 0.637 | neutral | N | 0.46931471 | None | None | I |
K/F | 0.7308 | likely_pathogenic | 0.7805 | pathogenic | -0.124 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | I |
K/G | 0.4491 | ambiguous | 0.5297 | ambiguous | -0.333 | Destabilizing | 1.0 | D | 0.683 | prob.neutral | None | None | None | None | I |
K/H | 0.2308 | likely_benign | 0.2676 | benign | -0.641 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | I |
K/I | 0.26 | likely_benign | 0.2836 | benign | 0.518 | Stabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | I |
K/L | 0.299 | likely_benign | 0.3549 | ambiguous | 0.518 | Stabilizing | 1.0 | D | 0.683 | prob.neutral | None | None | None | None | I |
K/M | 0.2278 | likely_benign | 0.2596 | benign | 0.311 | Stabilizing | 1.0 | D | 0.732 | prob.delet. | D | 0.526480288 | None | None | I |
K/N | 0.3161 | likely_benign | 0.3518 | ambiguous | 0.15 | Stabilizing | 1.0 | D | 0.733 | prob.delet. | N | 0.507931813 | None | None | I |
K/P | 0.9165 | likely_pathogenic | 0.9439 | pathogenic | 0.349 | Stabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | I |
K/Q | 0.1169 | likely_benign | 0.1269 | benign | -0.011 | Destabilizing | 1.0 | D | 0.709 | prob.delet. | N | 0.490191414 | None | None | I |
K/R | 0.0865 | likely_benign | 0.093 | benign | -0.153 | Destabilizing | 0.999 | D | 0.591 | neutral | N | 0.487556541 | None | None | I |
K/S | 0.299 | likely_benign | 0.3447 | ambiguous | -0.4 | Destabilizing | 0.999 | D | 0.677 | prob.neutral | None | None | None | None | I |
K/T | 0.1109 | likely_benign | 0.1229 | benign | -0.204 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | N | 0.439994667 | None | None | I |
K/V | 0.1903 | likely_benign | 0.2182 | benign | 0.349 | Stabilizing | 1.0 | D | 0.735 | prob.delet. | None | None | None | None | I |
K/W | 0.7902 | likely_pathogenic | 0.833 | pathogenic | -0.085 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | I |
K/Y | 0.6323 | likely_pathogenic | 0.6797 | pathogenic | 0.244 | Stabilizing | 1.0 | D | 0.76 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.