Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18027 | 54304;54305;54306 | chr2:178605098;178605097;178605096 | chr2:179469825;179469824;179469823 |
N2AB | 16386 | 49381;49382;49383 | chr2:178605098;178605097;178605096 | chr2:179469825;179469824;179469823 |
N2A | 15459 | 46600;46601;46602 | chr2:178605098;178605097;178605096 | chr2:179469825;179469824;179469823 |
N2B | 8962 | 27109;27110;27111 | chr2:178605098;178605097;178605096 | chr2:179469825;179469824;179469823 |
Novex-1 | 9087 | 27484;27485;27486 | chr2:178605098;178605097;178605096 | chr2:179469825;179469824;179469823 |
Novex-2 | 9154 | 27685;27686;27687 | chr2:178605098;178605097;178605096 | chr2:179469825;179469824;179469823 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs374256705 | -2.069 | 0.961 | N | 0.749 | 0.195 | None | gnomAD-2.1.1 | 8.08E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.79E-05 | 0 |
K/E | rs374256705 | -2.069 | 0.961 | N | 0.749 | 0.195 | None | gnomAD-4.0.0 | 1.59331E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86228E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.3668 | ambiguous | 0.3647 | ambiguous | -0.405 | Destabilizing | 0.931 | D | 0.767 | deleterious | None | None | None | None | N |
K/C | 0.6195 | likely_pathogenic | 0.5866 | pathogenic | -0.631 | Destabilizing | 1.0 | D | 0.8 | deleterious | None | None | None | None | N |
K/D | 0.7239 | likely_pathogenic | 0.7223 | pathogenic | -0.84 | Destabilizing | 0.985 | D | 0.798 | deleterious | None | None | None | None | N |
K/E | 0.2451 | likely_benign | 0.2365 | benign | -0.759 | Destabilizing | 0.961 | D | 0.749 | deleterious | N | 0.461658019 | None | None | N |
K/F | 0.6622 | likely_pathogenic | 0.6333 | pathogenic | -0.306 | Destabilizing | 0.996 | D | 0.819 | deleterious | None | None | None | None | N |
K/G | 0.6044 | likely_pathogenic | 0.5871 | pathogenic | -0.747 | Destabilizing | 0.092 | N | 0.531 | neutral | None | None | None | None | N |
K/H | 0.2634 | likely_benign | 0.2511 | benign | -1.218 | Destabilizing | 0.191 | N | 0.641 | neutral | None | None | None | None | N |
K/I | 0.2679 | likely_benign | 0.2557 | benign | 0.472 | Stabilizing | 0.989 | D | 0.809 | deleterious | N | 0.436954362 | None | None | N |
K/L | 0.3515 | ambiguous | 0.3369 | benign | 0.472 | Stabilizing | 0.97 | D | 0.771 | deleterious | None | None | None | None | N |
K/M | 0.2326 | likely_benign | 0.2204 | benign | 0.483 | Stabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | N |
K/N | 0.4763 | ambiguous | 0.4682 | ambiguous | -0.645 | Destabilizing | 0.961 | D | 0.765 | deleterious | N | 0.435684926 | None | None | N |
K/P | 0.961 | likely_pathogenic | 0.955 | pathogenic | 0.209 | Stabilizing | 0.999 | D | 0.777 | deleterious | None | None | None | None | N |
K/Q | 0.1382 | likely_benign | 0.1335 | benign | -0.826 | Destabilizing | 0.994 | D | 0.753 | deleterious | N | 0.467450628 | None | None | N |
K/R | 0.086 | likely_benign | 0.0824 | benign | -0.644 | Destabilizing | 0.961 | D | 0.729 | prob.delet. | N | 0.414597578 | None | None | N |
K/S | 0.4291 | ambiguous | 0.4266 | ambiguous | -1.14 | Destabilizing | 0.942 | D | 0.757 | deleterious | None | None | None | None | N |
K/T | 0.1616 | likely_benign | 0.1591 | benign | -0.875 | Destabilizing | 0.248 | N | 0.586 | neutral | N | 0.408767683 | None | None | N |
K/V | 0.2343 | likely_benign | 0.2289 | benign | 0.209 | Stabilizing | 0.97 | D | 0.768 | deleterious | None | None | None | None | N |
K/W | 0.7237 | likely_pathogenic | 0.6905 | pathogenic | -0.26 | Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | N |
K/Y | 0.6016 | likely_pathogenic | 0.566 | pathogenic | 0.111 | Stabilizing | 0.991 | D | 0.771 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.