Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18029 | 54310;54311;54312 | chr2:178605092;178605091;178605090 | chr2:179469819;179469818;179469817 |
N2AB | 16388 | 49387;49388;49389 | chr2:178605092;178605091;178605090 | chr2:179469819;179469818;179469817 |
N2A | 15461 | 46606;46607;46608 | chr2:178605092;178605091;178605090 | chr2:179469819;179469818;179469817 |
N2B | 8964 | 27115;27116;27117 | chr2:178605092;178605091;178605090 | chr2:179469819;179469818;179469817 |
Novex-1 | 9089 | 27490;27491;27492 | chr2:178605092;178605091;178605090 | chr2:179469819;179469818;179469817 |
Novex-2 | 9156 | 27691;27692;27693 | chr2:178605092;178605091;178605090 | chr2:179469819;179469818;179469817 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | 0.061 | N | 0.279 | 0.2 | 0.223146558224 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1495 | likely_benign | 0.1544 | benign | -0.924 | Destabilizing | 0.826 | D | 0.446 | neutral | N | 0.447440715 | None | None | N |
E/C | 0.7522 | likely_pathogenic | 0.7547 | pathogenic | -0.586 | Destabilizing | 0.999 | D | 0.674 | neutral | None | None | None | None | N |
E/D | 0.219 | likely_benign | 0.2426 | benign | -1.421 | Destabilizing | 0.959 | D | 0.515 | neutral | N | 0.474357957 | None | None | N |
E/F | 0.6348 | likely_pathogenic | 0.6334 | pathogenic | -0.596 | Destabilizing | 0.997 | D | 0.637 | neutral | None | None | None | None | N |
E/G | 0.2543 | likely_benign | 0.2772 | benign | -1.339 | Destabilizing | 0.959 | D | 0.516 | neutral | N | 0.445979277 | None | None | N |
E/H | 0.3955 | ambiguous | 0.3897 | ambiguous | -0.971 | Destabilizing | 0.997 | D | 0.489 | neutral | None | None | None | None | N |
E/I | 0.2391 | likely_benign | 0.2338 | benign | 0.225 | Stabilizing | 0.982 | D | 0.617 | neutral | None | None | None | None | N |
E/K | 0.1929 | likely_benign | 0.1833 | benign | -1.039 | Destabilizing | 0.061 | N | 0.279 | neutral | N | 0.39314487 | None | None | N |
E/L | 0.3337 | likely_benign | 0.3391 | benign | 0.225 | Stabilizing | 0.939 | D | 0.544 | neutral | None | None | None | None | N |
E/M | 0.3483 | ambiguous | 0.3274 | benign | 0.832 | Stabilizing | 0.999 | D | 0.606 | neutral | None | None | None | None | N |
E/N | 0.2782 | likely_benign | 0.2895 | benign | -1.435 | Destabilizing | 0.969 | D | 0.465 | neutral | None | None | None | None | N |
E/P | 0.9869 | likely_pathogenic | 0.9908 | pathogenic | -0.137 | Destabilizing | 0.997 | D | 0.502 | neutral | None | None | None | None | N |
E/Q | 0.1264 | likely_benign | 0.1221 | benign | -1.199 | Destabilizing | 0.92 | D | 0.481 | neutral | N | 0.439629308 | None | None | N |
E/R | 0.3093 | likely_benign | 0.2934 | benign | -0.906 | Destabilizing | 0.884 | D | 0.45 | neutral | None | None | None | None | N |
E/S | 0.1775 | likely_benign | 0.1803 | benign | -1.899 | Destabilizing | 0.884 | D | 0.497 | neutral | None | None | None | None | N |
E/T | 0.1629 | likely_benign | 0.1631 | benign | -1.539 | Destabilizing | 0.17 | N | 0.353 | neutral | None | None | None | None | N |
E/V | 0.1559 | likely_benign | 0.1544 | benign | -0.137 | Destabilizing | 0.92 | D | 0.519 | neutral | N | 0.418600675 | None | None | N |
E/W | 0.8869 | likely_pathogenic | 0.8815 | pathogenic | -0.556 | Destabilizing | 0.999 | D | 0.701 | prob.neutral | None | None | None | None | N |
E/Y | 0.5718 | likely_pathogenic | 0.5603 | ambiguous | -0.391 | Destabilizing | 0.997 | D | 0.605 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.