Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18032 | 54319;54320;54321 | chr2:178605083;178605082;178605081 | chr2:179469810;179469809;179469808 |
N2AB | 16391 | 49396;49397;49398 | chr2:178605083;178605082;178605081 | chr2:179469810;179469809;179469808 |
N2A | 15464 | 46615;46616;46617 | chr2:178605083;178605082;178605081 | chr2:179469810;179469809;179469808 |
N2B | 8967 | 27124;27125;27126 | chr2:178605083;178605082;178605081 | chr2:179469810;179469809;179469808 |
Novex-1 | 9092 | 27499;27500;27501 | chr2:178605083;178605082;178605081 | chr2:179469810;179469809;179469808 |
Novex-2 | 9159 | 27700;27701;27702 | chr2:178605083;178605082;178605081 | chr2:179469810;179469809;179469808 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | None | None | 0.896 | D | 0.81 | 0.844 | 0.818036558674 | gnomAD-4.0.0 | 1.59341E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02828E-05 |
I/V | rs1227589199 | -1.488 | 0.437 | D | 0.421 | 0.522 | 0.528860544761 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
I/V | rs1227589199 | -1.488 | 0.437 | D | 0.421 | 0.522 | 0.528860544761 | gnomAD-4.0.0 | 3.1867E-06 | None | None | None | None | N | None | 0 | 4.57498E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9321 | likely_pathogenic | 0.9621 | pathogenic | -2.847 | Highly Destabilizing | 0.919 | D | 0.719 | prob.delet. | None | None | None | None | N |
I/C | 0.9159 | likely_pathogenic | 0.9493 | pathogenic | -2.213 | Highly Destabilizing | 0.999 | D | 0.779 | deleterious | None | None | None | None | N |
I/D | 0.9904 | likely_pathogenic | 0.9955 | pathogenic | -3.557 | Highly Destabilizing | 0.996 | D | 0.881 | deleterious | None | None | None | None | N |
I/E | 0.9857 | likely_pathogenic | 0.993 | pathogenic | -3.366 | Highly Destabilizing | 0.988 | D | 0.88 | deleterious | None | None | None | None | N |
I/F | 0.2789 | likely_benign | 0.3791 | ambiguous | -1.713 | Destabilizing | 0.968 | D | 0.758 | deleterious | D | 0.563898921 | None | None | N |
I/G | 0.9872 | likely_pathogenic | 0.9938 | pathogenic | -3.354 | Highly Destabilizing | 0.988 | D | 0.877 | deleterious | None | None | None | None | N |
I/H | 0.9267 | likely_pathogenic | 0.9604 | pathogenic | -2.845 | Highly Destabilizing | 0.999 | D | 0.861 | deleterious | None | None | None | None | N |
I/K | 0.9424 | likely_pathogenic | 0.9646 | pathogenic | -2.486 | Highly Destabilizing | 0.976 | D | 0.879 | deleterious | None | None | None | None | N |
I/L | 0.1273 | likely_benign | 0.1773 | benign | -1.374 | Destabilizing | 0.011 | N | 0.3 | neutral | D | 0.578630049 | None | None | N |
I/M | 0.2099 | likely_benign | 0.2944 | benign | -1.268 | Destabilizing | 0.437 | N | 0.444 | neutral | D | 0.566513453 | None | None | N |
I/N | 0.8558 | likely_pathogenic | 0.927 | pathogenic | -2.768 | Highly Destabilizing | 0.984 | D | 0.877 | deleterious | D | 0.630842704 | None | None | N |
I/P | 0.9927 | likely_pathogenic | 0.9949 | pathogenic | -1.848 | Destabilizing | 0.996 | D | 0.875 | deleterious | None | None | None | None | N |
I/Q | 0.9476 | likely_pathogenic | 0.9723 | pathogenic | -2.681 | Highly Destabilizing | 0.988 | D | 0.875 | deleterious | None | None | None | None | N |
I/R | 0.925 | likely_pathogenic | 0.9533 | pathogenic | -2.023 | Highly Destabilizing | 0.988 | D | 0.879 | deleterious | None | None | None | None | N |
I/S | 0.901 | likely_pathogenic | 0.947 | pathogenic | -3.361 | Highly Destabilizing | 0.984 | D | 0.847 | deleterious | D | 0.614591178 | None | None | N |
I/T | 0.9339 | likely_pathogenic | 0.9642 | pathogenic | -3.046 | Highly Destabilizing | 0.896 | D | 0.81 | deleterious | D | 0.61418757 | None | None | N |
I/V | 0.1524 | likely_benign | 0.1712 | benign | -1.848 | Destabilizing | 0.437 | N | 0.421 | neutral | D | 0.577529127 | None | None | N |
I/W | 0.9348 | likely_pathogenic | 0.9586 | pathogenic | -2.191 | Highly Destabilizing | 0.999 | D | 0.856 | deleterious | None | None | None | None | N |
I/Y | 0.8164 | likely_pathogenic | 0.8913 | pathogenic | -1.979 | Destabilizing | 0.988 | D | 0.795 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.