Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18033 | 54322;54323;54324 | chr2:178605080;178605079;178605078 | chr2:179469807;179469806;179469805 |
N2AB | 16392 | 49399;49400;49401 | chr2:178605080;178605079;178605078 | chr2:179469807;179469806;179469805 |
N2A | 15465 | 46618;46619;46620 | chr2:178605080;178605079;178605078 | chr2:179469807;179469806;179469805 |
N2B | 8968 | 27127;27128;27129 | chr2:178605080;178605079;178605078 | chr2:179469807;179469806;179469805 |
Novex-1 | 9093 | 27502;27503;27504 | chr2:178605080;178605079;178605078 | chr2:179469807;179469806;179469805 |
Novex-2 | 9160 | 27703;27704;27705 | chr2:178605080;178605079;178605078 | chr2:179469807;179469806;179469805 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | rs2054465796 | None | 0.709 | N | 0.713 | 0.196 | 0.368743488249 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
P/S | rs2054465796 | None | 0.709 | N | 0.713 | 0.196 | 0.368743488249 | gnomAD-4.0.0 | 6.58172E-06 | None | None | None | None | N | None | 2.41464E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0986 | likely_benign | 0.095 | benign | -1.365 | Destabilizing | 0.004 | N | 0.385 | neutral | N | 0.493287648 | None | None | N |
P/C | 0.5205 | ambiguous | 0.5137 | ambiguous | -0.714 | Destabilizing | 0.98 | D | 0.775 | deleterious | None | None | None | None | N |
P/D | 0.4391 | ambiguous | 0.4146 | ambiguous | -1.461 | Destabilizing | 0.866 | D | 0.804 | deleterious | None | None | None | None | N |
P/E | 0.2804 | likely_benign | 0.2631 | benign | -1.517 | Destabilizing | 0.866 | D | 0.789 | deleterious | None | None | None | None | N |
P/F | 0.4659 | ambiguous | 0.4499 | ambiguous | -1.208 | Destabilizing | 0.98 | D | 0.796 | deleterious | None | None | None | None | N |
P/G | 0.2665 | likely_benign | 0.2485 | benign | -1.627 | Destabilizing | 0.48 | N | 0.694 | prob.neutral | None | None | None | None | N |
P/H | 0.2352 | likely_benign | 0.2251 | benign | -1.242 | Destabilizing | 0.991 | D | 0.762 | deleterious | N | 0.507526381 | None | None | N |
P/I | 0.2844 | likely_benign | 0.2819 | benign | -0.758 | Destabilizing | 0.866 | D | 0.813 | deleterious | None | None | None | None | N |
P/K | 0.237 | likely_benign | 0.2288 | benign | -1.169 | Destabilizing | 0.866 | D | 0.801 | deleterious | None | None | None | None | N |
P/L | 0.1276 | likely_benign | 0.1227 | benign | -0.758 | Destabilizing | 0.709 | D | 0.765 | deleterious | N | 0.484110804 | None | None | N |
P/M | 0.3082 | likely_benign | 0.2942 | benign | -0.424 | Destabilizing | 0.98 | D | 0.763 | deleterious | None | None | None | None | N |
P/N | 0.3067 | likely_benign | 0.2888 | benign | -0.802 | Destabilizing | 0.929 | D | 0.807 | deleterious | None | None | None | None | N |
P/Q | 0.1669 | likely_benign | 0.1556 | benign | -1.067 | Destabilizing | 0.929 | D | 0.814 | deleterious | None | None | None | None | N |
P/R | 0.1887 | likely_benign | 0.1808 | benign | -0.566 | Destabilizing | 0.83 | D | 0.805 | deleterious | N | 0.473451093 | None | None | N |
P/S | 0.1373 | likely_benign | 0.1241 | benign | -1.202 | Destabilizing | 0.709 | D | 0.713 | prob.delet. | N | 0.471602867 | None | None | N |
P/T | 0.1192 | likely_benign | 0.1099 | benign | -1.169 | Destabilizing | 0.709 | D | 0.709 | prob.delet. | N | 0.476491398 | None | None | N |
P/V | 0.2004 | likely_benign | 0.1973 | benign | -0.927 | Destabilizing | 0.764 | D | 0.703 | prob.neutral | None | None | None | None | N |
P/W | 0.6567 | likely_pathogenic | 0.6178 | pathogenic | -1.361 | Destabilizing | 0.993 | D | 0.773 | deleterious | None | None | None | None | N |
P/Y | 0.4675 | ambiguous | 0.4516 | ambiguous | -1.113 | Destabilizing | 0.98 | D | 0.797 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.