Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18040 | 54343;54344;54345 | chr2:178605059;178605058;178605057 | chr2:179469786;179469785;179469784 |
N2AB | 16399 | 49420;49421;49422 | chr2:178605059;178605058;178605057 | chr2:179469786;179469785;179469784 |
N2A | 15472 | 46639;46640;46641 | chr2:178605059;178605058;178605057 | chr2:179469786;179469785;179469784 |
N2B | 8975 | 27148;27149;27150 | chr2:178605059;178605058;178605057 | chr2:179469786;179469785;179469784 |
Novex-1 | 9100 | 27523;27524;27525 | chr2:178605059;178605058;178605057 | chr2:179469786;179469785;179469784 |
Novex-2 | 9167 | 27724;27725;27726 | chr2:178605059;178605058;178605057 | chr2:179469786;179469785;179469784 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs1465644822 | 0.013 | 0.959 | N | 0.488 | 0.221 | 0.350964488264 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.94E-06 | 0 |
K/E | rs1465644822 | 0.013 | 0.959 | N | 0.488 | 0.221 | 0.350964488264 | gnomAD-4.0.0 | 1.36952E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.80004E-06 | 0 | 0 |
K/R | None | None | 0.03 | N | 0.106 | 0.128 | 0.267299060538 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.3629 | ambiguous | 0.4058 | ambiguous | -0.516 | Destabilizing | 0.927 | D | 0.476 | neutral | None | None | None | None | N |
K/C | 0.6697 | likely_pathogenic | 0.7407 | pathogenic | -0.49 | Destabilizing | 1.0 | D | 0.547 | neutral | None | None | None | None | N |
K/D | 0.7756 | likely_pathogenic | 0.7969 | pathogenic | -0.307 | Destabilizing | 0.984 | D | 0.567 | neutral | None | None | None | None | N |
K/E | 0.3217 | likely_benign | 0.3235 | benign | -0.205 | Destabilizing | 0.959 | D | 0.488 | neutral | N | 0.414749506 | None | None | N |
K/F | 0.864 | likely_pathogenic | 0.8866 | pathogenic | -0.164 | Destabilizing | 0.999 | D | 0.567 | neutral | None | None | None | None | N |
K/G | 0.435 | ambiguous | 0.4731 | ambiguous | -0.89 | Destabilizing | 0.088 | N | 0.306 | neutral | None | None | None | None | N |
K/H | 0.4064 | ambiguous | 0.4438 | ambiguous | -1.277 | Destabilizing | 0.999 | D | 0.565 | neutral | None | None | None | None | N |
K/I | 0.5472 | ambiguous | 0.6352 | pathogenic | 0.453 | Stabilizing | 0.988 | D | 0.6 | neutral | N | 0.469490855 | None | None | N |
K/L | 0.5289 | ambiguous | 0.59 | pathogenic | 0.453 | Stabilizing | 0.969 | D | 0.533 | neutral | None | None | None | None | N |
K/M | 0.3236 | likely_benign | 0.3596 | ambiguous | 0.385 | Stabilizing | 1.0 | D | 0.558 | neutral | None | None | None | None | N |
K/N | 0.5729 | likely_pathogenic | 0.6154 | pathogenic | -0.492 | Destabilizing | 0.979 | D | 0.507 | neutral | N | 0.457927067 | None | None | N |
K/P | 0.925 | likely_pathogenic | 0.9308 | pathogenic | 0.16 | Stabilizing | 0.999 | D | 0.621 | neutral | None | None | None | None | N |
K/Q | 0.1843 | likely_benign | 0.1989 | benign | -0.58 | Destabilizing | 0.959 | D | 0.518 | neutral | N | 0.449768944 | None | None | N |
K/R | 0.0853 | likely_benign | 0.0893 | benign | -0.721 | Destabilizing | 0.03 | N | 0.106 | neutral | N | 0.418427317 | None | None | N |
K/S | 0.4401 | ambiguous | 0.4796 | ambiguous | -1.097 | Destabilizing | 0.864 | D | 0.485 | neutral | None | None | None | None | N |
K/T | 0.1694 | likely_benign | 0.1983 | benign | -0.794 | Destabilizing | 0.238 | N | 0.257 | neutral | N | 0.400033557 | None | None | N |
K/V | 0.4568 | ambiguous | 0.5468 | ambiguous | 0.16 | Stabilizing | 0.969 | D | 0.564 | neutral | None | None | None | None | N |
K/W | 0.8712 | likely_pathogenic | 0.8864 | pathogenic | -0.055 | Destabilizing | 1.0 | D | 0.563 | neutral | None | None | None | None | N |
K/Y | 0.7665 | likely_pathogenic | 0.792 | pathogenic | 0.222 | Stabilizing | 0.999 | D | 0.583 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.