Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18075 | 54448;54449;54450 | chr2:178604866;178604865;178604864 | chr2:179469593;179469592;179469591 |
N2AB | 16434 | 49525;49526;49527 | chr2:178604866;178604865;178604864 | chr2:179469593;179469592;179469591 |
N2A | 15507 | 46744;46745;46746 | chr2:178604866;178604865;178604864 | chr2:179469593;179469592;179469591 |
N2B | 9010 | 27253;27254;27255 | chr2:178604866;178604865;178604864 | chr2:179469593;179469592;179469591 |
Novex-1 | 9135 | 27628;27629;27630 | chr2:178604866;178604865;178604864 | chr2:179469593;179469592;179469591 |
Novex-2 | 9202 | 27829;27830;27831 | chr2:178604866;178604865;178604864 | chr2:179469593;179469592;179469591 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/S | rs2054404821 | None | 0.001 | N | 0.085 | 0.106 | 0.128392430309 | gnomAD-4.0.0 | 2.05463E-06 | None | None | None | None | N | None | 0 | 6.72797E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0947 | likely_benign | 0.1068 | benign | -0.899 | Destabilizing | 0.041 | N | 0.188 | neutral | N | 0.492681854 | None | None | N |
T/C | 0.3892 | ambiguous | 0.438 | ambiguous | -0.488 | Destabilizing | 0.818 | D | 0.414 | neutral | None | None | None | None | N |
T/D | 0.508 | ambiguous | 0.5778 | pathogenic | -0.067 | Destabilizing | 0.388 | N | 0.353 | neutral | None | None | None | None | N |
T/E | 0.4149 | ambiguous | 0.4919 | ambiguous | -0.049 | Destabilizing | 0.388 | N | 0.352 | neutral | None | None | None | None | N |
T/F | 0.3154 | likely_benign | 0.3672 | ambiguous | -0.88 | Destabilizing | 0.69 | D | 0.455 | neutral | None | None | None | None | N |
T/G | 0.2296 | likely_benign | 0.2558 | benign | -1.178 | Destabilizing | 0.116 | N | 0.351 | neutral | None | None | None | None | N |
T/H | 0.3321 | likely_benign | 0.375 | ambiguous | -1.365 | Destabilizing | 0.932 | D | 0.42 | neutral | None | None | None | None | N |
T/I | 0.2702 | likely_benign | 0.3356 | benign | -0.241 | Destabilizing | 0.076 | N | 0.351 | neutral | N | 0.456241051 | None | None | N |
T/K | 0.298 | likely_benign | 0.3492 | ambiguous | -0.706 | Destabilizing | 0.388 | N | 0.348 | neutral | None | None | None | None | N |
T/L | 0.1401 | likely_benign | 0.1546 | benign | -0.241 | Destabilizing | 0.116 | N | 0.372 | neutral | None | None | None | None | N |
T/M | 0.1012 | likely_benign | 0.1106 | benign | 0.005 | Stabilizing | 0.69 | D | 0.419 | neutral | None | None | None | None | N |
T/N | 0.1637 | likely_benign | 0.1768 | benign | -0.67 | Destabilizing | 0.324 | N | 0.258 | neutral | N | 0.506765872 | None | None | N |
T/P | 0.7318 | likely_pathogenic | 0.7453 | pathogenic | -0.428 | Destabilizing | 0.492 | N | 0.404 | neutral | N | 0.512134406 | None | None | N |
T/Q | 0.2848 | likely_benign | 0.3216 | benign | -0.786 | Destabilizing | 0.818 | D | 0.445 | neutral | None | None | None | None | N |
T/R | 0.2595 | likely_benign | 0.3034 | benign | -0.502 | Destabilizing | 0.69 | D | 0.433 | neutral | None | None | None | None | N |
T/S | 0.0982 | likely_benign | 0.1064 | benign | -0.999 | Destabilizing | 0.001 | N | 0.085 | neutral | N | 0.387839759 | None | None | N |
T/V | 0.1817 | likely_benign | 0.2143 | benign | -0.428 | Destabilizing | 0.001 | N | 0.095 | neutral | None | None | None | None | N |
T/W | 0.6674 | likely_pathogenic | 0.7111 | pathogenic | -0.802 | Destabilizing | 0.981 | D | 0.459 | neutral | None | None | None | None | N |
T/Y | 0.3848 | ambiguous | 0.4215 | ambiguous | -0.579 | Destabilizing | 0.818 | D | 0.455 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.