Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18076 | 54451;54452;54453 | chr2:178604863;178604862;178604861 | chr2:179469590;179469589;179469588 |
N2AB | 16435 | 49528;49529;49530 | chr2:178604863;178604862;178604861 | chr2:179469590;179469589;179469588 |
N2A | 15508 | 46747;46748;46749 | chr2:178604863;178604862;178604861 | chr2:179469590;179469589;179469588 |
N2B | 9011 | 27256;27257;27258 | chr2:178604863;178604862;178604861 | chr2:179469590;179469589;179469588 |
Novex-1 | 9136 | 27631;27632;27633 | chr2:178604863;178604862;178604861 | chr2:179469590;179469589;179469588 |
Novex-2 | 9203 | 27832;27833;27834 | chr2:178604863;178604862;178604861 | chr2:179469590;179469589;179469588 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/N | rs1250676624 | None | 0.122 | N | 0.115 | 0.199 | 0.17948927462 | gnomAD-3.1.2 | 6.59E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
D/N | rs1250676624 | None | 0.122 | N | 0.115 | 0.199 | 0.17948927462 | gnomAD-4.0.0 | 2.03057E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.4102E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.5223 | ambiguous | 0.4823 | ambiguous | -0.556 | Destabilizing | 0.925 | D | 0.514 | neutral | D | 0.523463334 | None | None | N |
D/C | 0.9249 | likely_pathogenic | 0.9142 | pathogenic | -0.23 | Destabilizing | 1.0 | D | 0.66 | neutral | None | None | None | None | N |
D/E | 0.4394 | ambiguous | 0.3709 | ambiguous | -0.387 | Destabilizing | 0.91 | D | 0.476 | neutral | N | 0.463164237 | None | None | N |
D/F | 0.9406 | likely_pathogenic | 0.9315 | pathogenic | -0.178 | Destabilizing | 0.999 | D | 0.658 | neutral | None | None | None | None | N |
D/G | 0.4444 | ambiguous | 0.3917 | ambiguous | -0.817 | Destabilizing | 0.91 | D | 0.505 | neutral | N | 0.466773655 | None | None | N |
D/H | 0.7592 | likely_pathogenic | 0.7228 | pathogenic | -0.116 | Destabilizing | 0.994 | D | 0.587 | neutral | N | 0.47390368 | None | None | N |
D/I | 0.9179 | likely_pathogenic | 0.909 | pathogenic | 0.109 | Stabilizing | 0.996 | D | 0.65 | neutral | None | None | None | None | N |
D/K | 0.8804 | likely_pathogenic | 0.8565 | pathogenic | -0.018 | Destabilizing | 0.97 | D | 0.521 | neutral | None | None | None | None | N |
D/L | 0.8822 | likely_pathogenic | 0.8541 | pathogenic | 0.109 | Stabilizing | 0.996 | D | 0.587 | neutral | None | None | None | None | N |
D/M | 0.9383 | likely_pathogenic | 0.924 | pathogenic | 0.297 | Stabilizing | 1.0 | D | 0.648 | neutral | None | None | None | None | N |
D/N | 0.2002 | likely_benign | 0.1798 | benign | -0.463 | Destabilizing | 0.122 | N | 0.115 | neutral | N | 0.493756503 | None | None | N |
D/P | 0.9784 | likely_pathogenic | 0.9774 | pathogenic | -0.09 | Destabilizing | 0.996 | D | 0.569 | neutral | None | None | None | None | N |
D/Q | 0.7867 | likely_pathogenic | 0.7522 | pathogenic | -0.387 | Destabilizing | 0.996 | D | 0.496 | neutral | None | None | None | None | N |
D/R | 0.8719 | likely_pathogenic | 0.8568 | pathogenic | 0.253 | Stabilizing | 0.996 | D | 0.605 | neutral | None | None | None | None | N |
D/S | 0.3655 | ambiguous | 0.3205 | benign | -0.608 | Destabilizing | 0.559 | D | 0.253 | neutral | None | None | None | None | N |
D/T | 0.7209 | likely_pathogenic | 0.6696 | pathogenic | -0.396 | Destabilizing | 0.942 | D | 0.486 | neutral | None | None | None | None | N |
D/V | 0.7889 | likely_pathogenic | 0.7704 | pathogenic | -0.09 | Destabilizing | 0.994 | D | 0.609 | neutral | N | 0.475927915 | None | None | N |
D/W | 0.9846 | likely_pathogenic | 0.9829 | pathogenic | 0.067 | Stabilizing | 1.0 | D | 0.701 | prob.neutral | None | None | None | None | N |
D/Y | 0.6885 | likely_pathogenic | 0.6691 | pathogenic | 0.076 | Stabilizing | 0.998 | D | 0.659 | neutral | N | 0.483943312 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.