Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18098 | 54517;54518;54519 | chr2:178604797;178604796;178604795 | chr2:179469524;179469523;179469522 |
N2AB | 16457 | 49594;49595;49596 | chr2:178604797;178604796;178604795 | chr2:179469524;179469523;179469522 |
N2A | 15530 | 46813;46814;46815 | chr2:178604797;178604796;178604795 | chr2:179469524;179469523;179469522 |
N2B | 9033 | 27322;27323;27324 | chr2:178604797;178604796;178604795 | chr2:179469524;179469523;179469522 |
Novex-1 | 9158 | 27697;27698;27699 | chr2:178604797;178604796;178604795 | chr2:179469524;179469523;179469522 |
Novex-2 | 9225 | 27898;27899;27900 | chr2:178604797;178604796;178604795 | chr2:179469524;179469523;179469522 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.999 | N | 0.523 | 0.564 | 0.383256108077 | gnomAD-4.0.0 | 1.36946E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.8E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.2322 | likely_benign | 0.2372 | benign | -0.691 | Destabilizing | 0.999 | D | 0.523 | neutral | N | 0.498693432 | None | None | I |
T/C | 0.7155 | likely_pathogenic | 0.7037 | pathogenic | -0.414 | Destabilizing | 1.0 | D | 0.69 | prob.neutral | None | None | None | None | I |
T/D | 0.7268 | likely_pathogenic | 0.6964 | pathogenic | -0.284 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | I |
T/E | 0.6569 | likely_pathogenic | 0.6399 | pathogenic | -0.279 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | I |
T/F | 0.543 | ambiguous | 0.533 | ambiguous | -0.649 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | I |
T/G | 0.5002 | ambiguous | 0.4886 | ambiguous | -0.963 | Destabilizing | 1.0 | D | 0.7 | prob.neutral | None | None | None | None | I |
T/H | 0.5927 | likely_pathogenic | 0.5566 | ambiguous | -1.224 | Destabilizing | 1.0 | D | 0.713 | prob.delet. | None | None | None | None | I |
T/I | 0.3846 | ambiguous | 0.3971 | ambiguous | -0.057 | Destabilizing | 1.0 | D | 0.777 | deleterious | D | 0.523447478 | None | None | I |
T/K | 0.6086 | likely_pathogenic | 0.572 | pathogenic | -0.839 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | I |
T/L | 0.1782 | likely_benign | 0.1877 | benign | -0.057 | Destabilizing | 0.999 | D | 0.675 | neutral | None | None | None | None | I |
T/M | 0.1573 | likely_benign | 0.1665 | benign | 0.14 | Stabilizing | 1.0 | D | 0.706 | prob.neutral | None | None | None | None | I |
T/N | 0.2864 | likely_benign | 0.2788 | benign | -0.75 | Destabilizing | 1.0 | D | 0.775 | deleterious | N | 0.487679522 | None | None | I |
T/P | 0.7496 | likely_pathogenic | 0.7494 | pathogenic | -0.235 | Destabilizing | 1.0 | D | 0.764 | deleterious | D | 0.526965905 | None | None | I |
T/Q | 0.519 | ambiguous | 0.4977 | ambiguous | -0.87 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | I |
T/R | 0.5919 | likely_pathogenic | 0.5476 | ambiguous | -0.606 | Destabilizing | 1.0 | D | 0.78 | deleterious | None | None | None | None | I |
T/S | 0.1657 | likely_benign | 0.1537 | benign | -0.985 | Destabilizing | 0.999 | D | 0.515 | neutral | N | 0.51028618 | None | None | I |
T/V | 0.3245 | likely_benign | 0.3319 | benign | -0.235 | Destabilizing | 0.999 | D | 0.61 | neutral | None | None | None | None | I |
T/W | 0.8766 | likely_pathogenic | 0.8639 | pathogenic | -0.631 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | I |
T/Y | 0.6322 | likely_pathogenic | 0.6274 | pathogenic | -0.413 | Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.