Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18107 | 54544;54545;54546 | chr2:178604770;178604769;178604768 | chr2:179469497;179469496;179469495 |
N2AB | 16466 | 49621;49622;49623 | chr2:178604770;178604769;178604768 | chr2:179469497;179469496;179469495 |
N2A | 15539 | 46840;46841;46842 | chr2:178604770;178604769;178604768 | chr2:179469497;179469496;179469495 |
N2B | 9042 | 27349;27350;27351 | chr2:178604770;178604769;178604768 | chr2:179469497;179469496;179469495 |
Novex-1 | 9167 | 27724;27725;27726 | chr2:178604770;178604769;178604768 | chr2:179469497;179469496;179469495 |
Novex-2 | 9234 | 27925;27926;27927 | chr2:178604770;178604769;178604768 | chr2:179469497;179469496;179469495 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/G | rs794729457 | None | 0.98 | N | 0.548 | 0.243 | 0.236890367714 | gnomAD-4.0.0 | 3.18959E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.72971E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.4735 | ambiguous | 0.4446 | ambiguous | -1.152 | Destabilizing | 1.0 | D | 0.585 | neutral | None | None | None | None | N |
A/D | 0.6619 | likely_pathogenic | 0.6206 | pathogenic | -1.552 | Destabilizing | 0.942 | D | 0.573 | neutral | None | None | None | None | N |
A/E | 0.6194 | likely_pathogenic | 0.5774 | pathogenic | -1.617 | Destabilizing | 0.248 | N | 0.376 | neutral | N | 0.448696217 | None | None | N |
A/F | 0.4337 | ambiguous | 0.4028 | ambiguous | -1.278 | Destabilizing | 0.996 | D | 0.637 | neutral | None | None | None | None | N |
A/G | 0.1748 | likely_benign | 0.1648 | benign | -1.296 | Destabilizing | 0.98 | D | 0.548 | neutral | N | 0.469015561 | None | None | N |
A/H | 0.7321 | likely_pathogenic | 0.7128 | pathogenic | -1.174 | Destabilizing | 1.0 | D | 0.642 | neutral | None | None | None | None | N |
A/I | 0.2221 | likely_benign | 0.2157 | benign | -0.698 | Destabilizing | 0.942 | D | 0.531 | neutral | None | None | None | None | N |
A/K | 0.7946 | likely_pathogenic | 0.7603 | pathogenic | -1.205 | Destabilizing | 0.97 | D | 0.54 | neutral | None | None | None | None | N |
A/L | 0.2433 | likely_benign | 0.2327 | benign | -0.698 | Destabilizing | 0.871 | D | 0.523 | neutral | None | None | None | None | N |
A/M | 0.3107 | likely_benign | 0.2907 | benign | -0.574 | Destabilizing | 0.996 | D | 0.585 | neutral | None | None | None | None | N |
A/N | 0.4635 | ambiguous | 0.4327 | ambiguous | -0.952 | Destabilizing | 0.996 | D | 0.63 | neutral | None | None | None | None | N |
A/P | 0.4948 | ambiguous | 0.4777 | ambiguous | -0.793 | Destabilizing | 0.998 | D | 0.575 | neutral | N | 0.489852193 | None | None | N |
A/Q | 0.6478 | likely_pathogenic | 0.6292 | pathogenic | -1.239 | Destabilizing | 0.991 | D | 0.574 | neutral | None | None | None | None | N |
A/R | 0.745 | likely_pathogenic | 0.7082 | pathogenic | -0.718 | Destabilizing | 0.991 | D | 0.575 | neutral | None | None | None | None | N |
A/S | 0.115 | likely_benign | 0.1138 | benign | -1.279 | Destabilizing | 0.961 | D | 0.557 | neutral | N | 0.471573076 | None | None | N |
A/T | 0.1175 | likely_benign | 0.1104 | benign | -1.268 | Destabilizing | 0.961 | D | 0.548 | neutral | N | 0.459913288 | None | None | N |
A/V | 0.1199 | likely_benign | 0.1172 | benign | -0.793 | Destabilizing | 0.122 | N | 0.236 | neutral | N | 0.454179394 | None | None | N |
A/W | 0.8451 | likely_pathogenic | 0.8262 | pathogenic | -1.464 | Destabilizing | 1.0 | D | 0.669 | neutral | None | None | None | None | N |
A/Y | 0.6119 | likely_pathogenic | 0.599 | pathogenic | -1.129 | Destabilizing | 0.999 | D | 0.639 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.