Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18113 | 54562;54563;54564 | chr2:178604752;178604751;178604750 | chr2:179469479;179469478;179469477 |
N2AB | 16472 | 49639;49640;49641 | chr2:178604752;178604751;178604750 | chr2:179469479;179469478;179469477 |
N2A | 15545 | 46858;46859;46860 | chr2:178604752;178604751;178604750 | chr2:179469479;179469478;179469477 |
N2B | 9048 | 27367;27368;27369 | chr2:178604752;178604751;178604750 | chr2:179469479;179469478;179469477 |
Novex-1 | 9173 | 27742;27743;27744 | chr2:178604752;178604751;178604750 | chr2:179469479;179469478;179469477 |
Novex-2 | 9240 | 27943;27944;27945 | chr2:178604752;178604751;178604750 | chr2:179469479;179469478;179469477 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | 0.698 | N | 0.487 | 0.231 | 0.347438807231 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1469 | likely_benign | 0.1275 | benign | -0.086 | Destabilizing | 0.822 | D | 0.441 | neutral | N | 0.466897975 | None | None | N |
E/C | 0.8507 | likely_pathogenic | 0.7855 | pathogenic | -0.371 | Destabilizing | 0.998 | D | 0.635 | neutral | None | None | None | None | N |
E/D | 0.0847 | likely_benign | 0.0849 | benign | -0.209 | Destabilizing | 0.014 | N | 0.265 | neutral | N | 0.425475427 | None | None | N |
E/F | 0.7589 | likely_pathogenic | 0.6878 | pathogenic | -0.083 | Destabilizing | 0.998 | D | 0.543 | neutral | None | None | None | None | N |
E/G | 0.1898 | likely_benign | 0.164 | benign | -0.205 | Destabilizing | 0.822 | D | 0.419 | neutral | N | 0.446658776 | None | None | N |
E/H | 0.5478 | ambiguous | 0.4427 | ambiguous | 0.601 | Stabilizing | 0.978 | D | 0.389 | neutral | None | None | None | None | N |
E/I | 0.3272 | likely_benign | 0.2629 | benign | 0.176 | Stabilizing | 0.978 | D | 0.551 | neutral | None | None | None | None | N |
E/K | 0.2371 | likely_benign | 0.178 | benign | 0.239 | Stabilizing | 0.698 | D | 0.487 | neutral | N | 0.439943447 | None | None | N |
E/L | 0.3704 | ambiguous | 0.3012 | benign | 0.176 | Stabilizing | 0.956 | D | 0.53 | neutral | None | None | None | None | N |
E/M | 0.4934 | ambiguous | 0.4183 | ambiguous | -0.139 | Destabilizing | 0.998 | D | 0.509 | neutral | None | None | None | None | N |
E/N | 0.2045 | likely_benign | 0.1859 | benign | 0.053 | Stabilizing | 0.915 | D | 0.387 | neutral | None | None | None | None | N |
E/P | 0.3413 | ambiguous | 0.3112 | benign | 0.106 | Stabilizing | 0.978 | D | 0.399 | neutral | None | None | None | None | N |
E/Q | 0.1838 | likely_benign | 0.1412 | benign | 0.066 | Stabilizing | 0.153 | N | 0.265 | neutral | N | 0.462820307 | None | None | N |
E/R | 0.4134 | ambiguous | 0.3115 | benign | 0.563 | Stabilizing | 0.956 | D | 0.39 | neutral | None | None | None | None | N |
E/S | 0.1814 | likely_benign | 0.1645 | benign | -0.137 | Destabilizing | 0.86 | D | 0.451 | neutral | None | None | None | None | N |
E/T | 0.2027 | likely_benign | 0.1796 | benign | -0.032 | Destabilizing | 0.956 | D | 0.363 | neutral | None | None | None | None | N |
E/V | 0.2067 | likely_benign | 0.1646 | benign | 0.106 | Stabilizing | 0.971 | D | 0.471 | neutral | N | 0.457835775 | None | None | N |
E/W | 0.9158 | likely_pathogenic | 0.867 | pathogenic | -0.021 | Destabilizing | 0.998 | D | 0.646 | neutral | None | None | None | None | N |
E/Y | 0.658 | likely_pathogenic | 0.5708 | pathogenic | 0.14 | Stabilizing | 0.993 | D | 0.488 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.