Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18136 | 54631;54632;54633 | chr2:178604281;178604280;178604279 | chr2:179469008;179469007;179469006 |
N2AB | 16495 | 49708;49709;49710 | chr2:178604281;178604280;178604279 | chr2:179469008;179469007;179469006 |
N2A | 15568 | 46927;46928;46929 | chr2:178604281;178604280;178604279 | chr2:179469008;179469007;179469006 |
N2B | 9071 | 27436;27437;27438 | chr2:178604281;178604280;178604279 | chr2:179469008;179469007;179469006 |
Novex-1 | 9196 | 27811;27812;27813 | chr2:178604281;178604280;178604279 | chr2:179469008;179469007;179469006 |
Novex-2 | 9263 | 28012;28013;28014 | chr2:178604281;178604280;178604279 | chr2:179469008;179469007;179469006 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/H | None | None | 0.927 | N | 0.423 | 0.074 | 0.154104182512 | gnomAD-4.0.0 | 7.32324E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.78336E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.1613 | likely_benign | 0.1891 | benign | -0.825 | Destabilizing | 0.176 | N | 0.256 | neutral | None | None | None | None | N |
Q/C | 0.4748 | ambiguous | 0.495 | ambiguous | -0.16 | Destabilizing | 0.995 | D | 0.502 | neutral | None | None | None | None | N |
Q/D | 0.3452 | ambiguous | 0.4248 | ambiguous | -0.563 | Destabilizing | 0.329 | N | 0.247 | neutral | None | None | None | None | N |
Q/E | 0.0772 | likely_benign | 0.0865 | benign | -0.443 | Destabilizing | 0.001 | N | 0.086 | neutral | N | 0.371427512 | None | None | N |
Q/F | 0.5034 | ambiguous | 0.5534 | ambiguous | -0.464 | Destabilizing | 0.981 | D | 0.515 | neutral | None | None | None | None | N |
Q/G | 0.2868 | likely_benign | 0.3342 | benign | -1.197 | Destabilizing | 0.495 | N | 0.336 | neutral | None | None | None | None | N |
Q/H | 0.1907 | likely_benign | 0.2089 | benign | -0.948 | Destabilizing | 0.927 | D | 0.423 | neutral | N | 0.466687331 | None | None | N |
Q/I | 0.1896 | likely_benign | 0.2148 | benign | 0.136 | Stabilizing | 0.704 | D | 0.578 | neutral | None | None | None | None | N |
Q/K | 0.1041 | likely_benign | 0.1199 | benign | -0.316 | Destabilizing | 0.002 | N | 0.114 | neutral | N | 0.431649251 | None | None | N |
Q/L | 0.1077 | likely_benign | 0.1129 | benign | 0.136 | Stabilizing | 0.425 | N | 0.388 | neutral | N | 0.466167256 | None | None | N |
Q/M | 0.2357 | likely_benign | 0.2528 | benign | 0.599 | Stabilizing | 0.981 | D | 0.441 | neutral | None | None | None | None | N |
Q/N | 0.1907 | likely_benign | 0.2197 | benign | -0.904 | Destabilizing | 0.031 | N | 0.126 | neutral | None | None | None | None | N |
Q/P | 0.208 | likely_benign | 0.2427 | benign | -0.154 | Destabilizing | 0.784 | D | 0.431 | neutral | N | 0.463473668 | None | None | N |
Q/R | 0.1226 | likely_benign | 0.1391 | benign | -0.261 | Destabilizing | 0.27 | N | 0.309 | neutral | N | 0.44202096 | None | None | N |
Q/S | 0.1579 | likely_benign | 0.1835 | benign | -1.089 | Destabilizing | 0.037 | N | 0.125 | neutral | None | None | None | None | N |
Q/T | 0.1097 | likely_benign | 0.123 | benign | -0.765 | Destabilizing | 0.013 | N | 0.204 | neutral | None | None | None | None | N |
Q/V | 0.1296 | likely_benign | 0.1457 | benign | -0.154 | Destabilizing | 0.495 | N | 0.434 | neutral | None | None | None | None | N |
Q/W | 0.5271 | ambiguous | 0.5458 | ambiguous | -0.281 | Destabilizing | 0.995 | D | 0.519 | neutral | None | None | None | None | N |
Q/Y | 0.3562 | ambiguous | 0.3929 | ambiguous | -0.065 | Destabilizing | 0.981 | D | 0.538 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.