Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18138 | 54637;54638;54639 | chr2:178604275;178604274;178604273 | chr2:179469002;179469001;179469000 |
N2AB | 16497 | 49714;49715;49716 | chr2:178604275;178604274;178604273 | chr2:179469002;179469001;179469000 |
N2A | 15570 | 46933;46934;46935 | chr2:178604275;178604274;178604273 | chr2:179469002;179469001;179469000 |
N2B | 9073 | 27442;27443;27444 | chr2:178604275;178604274;178604273 | chr2:179469002;179469001;179469000 |
Novex-1 | 9198 | 27817;27818;27819 | chr2:178604275;178604274;178604273 | chr2:179469002;179469001;179469000 |
Novex-2 | 9265 | 28018;28019;28020 | chr2:178604275;178604274;178604273 | chr2:179469002;179469001;179469000 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | None | None | 0.425 | N | 0.515 | 0.081 | 0.275641507738 | gnomAD-4.0.0 | 1.82077E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.86812E-05 | None | 0 | 0 | 0 | 0 | 0 |
E/Q | None | None | 0.01 | N | 0.254 | 0.148 | 0.192905019026 | gnomAD-4.0.0 | 1.86926E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.29746E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.4449 | ambiguous | 0.4101 | ambiguous | -0.758 | Destabilizing | 0.425 | N | 0.515 | neutral | N | 0.475981605 | None | None | N |
E/C | 0.8844 | likely_pathogenic | 0.8868 | pathogenic | -0.323 | Destabilizing | 0.995 | D | 0.607 | neutral | None | None | None | None | N |
E/D | 0.6346 | likely_pathogenic | 0.6809 | pathogenic | -1.728 | Destabilizing | 0.425 | N | 0.515 | neutral | N | 0.489700264 | None | None | N |
E/F | 0.8789 | likely_pathogenic | 0.9029 | pathogenic | -0.199 | Destabilizing | 0.893 | D | 0.611 | neutral | None | None | None | None | N |
E/G | 0.7197 | likely_pathogenic | 0.7396 | pathogenic | -1.233 | Destabilizing | 0.642 | D | 0.613 | neutral | D | 0.527045144 | None | None | N |
E/H | 0.7997 | likely_pathogenic | 0.8321 | pathogenic | -0.362 | Destabilizing | 0.944 | D | 0.585 | neutral | None | None | None | None | N |
E/I | 0.4417 | ambiguous | 0.394 | ambiguous | 0.59 | Stabilizing | 0.031 | N | 0.553 | neutral | None | None | None | None | N |
E/K | 0.6156 | likely_pathogenic | 0.6227 | pathogenic | -0.87 | Destabilizing | 0.01 | N | 0.245 | neutral | N | 0.405081512 | None | None | N |
E/L | 0.6487 | likely_pathogenic | 0.6256 | pathogenic | 0.59 | Stabilizing | 0.003 | N | 0.575 | neutral | None | None | None | None | N |
E/M | 0.6172 | likely_pathogenic | 0.5866 | pathogenic | 1.248 | Stabilizing | 0.893 | D | 0.551 | neutral | None | None | None | None | N |
E/N | 0.7711 | likely_pathogenic | 0.8005 | pathogenic | -1.419 | Destabilizing | 0.704 | D | 0.572 | neutral | None | None | None | None | N |
E/P | 0.995 | likely_pathogenic | 0.996 | pathogenic | 0.16 | Stabilizing | 0.828 | D | 0.605 | neutral | None | None | None | None | N |
E/Q | 0.2185 | likely_benign | 0.208 | benign | -1.065 | Destabilizing | 0.01 | N | 0.254 | neutral | N | 0.404446794 | None | None | N |
E/R | 0.6925 | likely_pathogenic | 0.7095 | pathogenic | -0.792 | Destabilizing | 0.329 | N | 0.547 | neutral | None | None | None | None | N |
E/S | 0.5405 | ambiguous | 0.5477 | ambiguous | -1.983 | Destabilizing | 0.495 | N | 0.531 | neutral | None | None | None | None | N |
E/T | 0.5296 | ambiguous | 0.4917 | ambiguous | -1.535 | Destabilizing | 0.495 | N | 0.598 | neutral | None | None | None | None | N |
E/V | 0.3487 | ambiguous | 0.3115 | benign | 0.16 | Stabilizing | 0.27 | N | 0.568 | neutral | N | 0.459934717 | None | None | N |
E/W | 0.971 | likely_pathogenic | 0.977 | pathogenic | -0.244 | Destabilizing | 0.995 | D | 0.627 | neutral | None | None | None | None | N |
E/Y | 0.8327 | likely_pathogenic | 0.8677 | pathogenic | 0.033 | Stabilizing | 0.981 | D | 0.589 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.