Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18158 | 54697;54698;54699 | chr2:178604215;178604214;178604213 | chr2:179468942;179468941;179468940 |
N2AB | 16517 | 49774;49775;49776 | chr2:178604215;178604214;178604213 | chr2:179468942;179468941;179468940 |
N2A | 15590 | 46993;46994;46995 | chr2:178604215;178604214;178604213 | chr2:179468942;179468941;179468940 |
N2B | 9093 | 27502;27503;27504 | chr2:178604215;178604214;178604213 | chr2:179468942;179468941;179468940 |
Novex-1 | 9218 | 27877;27878;27879 | chr2:178604215;178604214;178604213 | chr2:179468942;179468941;179468940 |
Novex-2 | 9285 | 28078;28079;28080 | chr2:178604215;178604214;178604213 | chr2:179468942;179468941;179468940 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | None | None | 0.003 | N | 0.284 | 0.064 | 0.329282125956 | gnomAD-4.0.0 | 1.37133E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.8014E-06 | 0 | 0 |
V/L | None | None | 0.046 | N | 0.412 | 0.123 | 0.435915822735 | gnomAD-4.0.0 | 6.85663E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.16632E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.3074 | likely_benign | 0.253 | benign | -1.541 | Destabilizing | 0.046 | N | 0.431 | neutral | N | 0.472076347 | None | None | N |
V/C | 0.8442 | likely_pathogenic | 0.8369 | pathogenic | -1.149 | Destabilizing | 0.892 | D | 0.693 | prob.delet. | None | None | None | None | N |
V/D | 0.8876 | likely_pathogenic | 0.8567 | pathogenic | -1.728 | Destabilizing | 0.519 | D | 0.862 | deleterious | None | None | None | None | N |
V/E | 0.7218 | likely_pathogenic | 0.648 | pathogenic | -1.566 | Destabilizing | 0.449 | N | 0.793 | deleterious | N | 0.496056405 | None | None | N |
V/F | 0.4275 | ambiguous | 0.3465 | ambiguous | -0.846 | Destabilizing | 0.687 | D | 0.678 | prob.neutral | None | None | None | None | N |
V/G | 0.6229 | likely_pathogenic | 0.5808 | pathogenic | -2.005 | Highly Destabilizing | 0.449 | N | 0.792 | deleterious | N | 0.496563384 | None | None | N |
V/H | 0.8666 | likely_pathogenic | 0.8362 | pathogenic | -1.534 | Destabilizing | 0.962 | D | 0.829 | deleterious | None | None | None | None | N |
V/I | 0.0895 | likely_benign | 0.0838 | benign | -0.296 | Destabilizing | 0.003 | N | 0.284 | neutral | N | 0.482499359 | None | None | N |
V/K | 0.726 | likely_pathogenic | 0.6756 | pathogenic | -1.457 | Destabilizing | 0.519 | D | 0.794 | deleterious | None | None | None | None | N |
V/L | 0.4049 | ambiguous | 0.3722 | ambiguous | -0.296 | Destabilizing | 0.046 | N | 0.412 | neutral | N | 0.463046991 | None | None | N |
V/M | 0.2732 | likely_benign | 0.2207 | benign | -0.328 | Destabilizing | 0.687 | D | 0.533 | neutral | None | None | None | None | N |
V/N | 0.7485 | likely_pathogenic | 0.7237 | pathogenic | -1.682 | Destabilizing | 0.519 | D | 0.869 | deleterious | None | None | None | None | N |
V/P | 0.9608 | likely_pathogenic | 0.9641 | pathogenic | -0.68 | Destabilizing | 0.687 | D | 0.811 | deleterious | None | None | None | None | N |
V/Q | 0.6913 | likely_pathogenic | 0.6357 | pathogenic | -1.588 | Destabilizing | 0.687 | D | 0.823 | deleterious | None | None | None | None | N |
V/R | 0.7166 | likely_pathogenic | 0.6624 | pathogenic | -1.193 | Destabilizing | 0.519 | D | 0.873 | deleterious | None | None | None | None | N |
V/S | 0.5904 | likely_pathogenic | 0.5314 | ambiguous | -2.271 | Highly Destabilizing | 0.351 | N | 0.743 | deleterious | None | None | None | None | N |
V/T | 0.2325 | likely_benign | 0.194 | benign | -1.966 | Destabilizing | 0.001 | N | 0.339 | neutral | None | None | None | None | N |
V/W | 0.9537 | likely_pathogenic | 0.9328 | pathogenic | -1.248 | Destabilizing | 0.962 | D | 0.769 | deleterious | None | None | None | None | N |
V/Y | 0.8335 | likely_pathogenic | 0.782 | pathogenic | -0.842 | Destabilizing | 0.687 | D | 0.674 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.