Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18203 | 54832;54833;54834 | chr2:178604080;178604079;178604078 | chr2:179468807;179468806;179468805 |
N2AB | 16562 | 49909;49910;49911 | chr2:178604080;178604079;178604078 | chr2:179468807;179468806;179468805 |
N2A | 15635 | 47128;47129;47130 | chr2:178604080;178604079;178604078 | chr2:179468807;179468806;179468805 |
N2B | 9138 | 27637;27638;27639 | chr2:178604080;178604079;178604078 | chr2:179468807;179468806;179468805 |
Novex-1 | 9263 | 28012;28013;28014 | chr2:178604080;178604079;178604078 | chr2:179468807;179468806;179468805 |
Novex-2 | 9330 | 28213;28214;28215 | chr2:178604080;178604079;178604078 | chr2:179468807;179468806;179468805 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | rs771560830 | -1.421 | 1.0 | N | 0.933 | 0.71 | 0.80784574723 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
L/P | rs771560830 | -1.421 | 1.0 | N | 0.933 | 0.71 | 0.80784574723 | gnomAD-4.0.0 | 4.78005E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.58846E-06 | 0 | 0 |
L/V | None | None | 0.999 | N | 0.589 | 0.203 | 0.388495093706 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9491 | likely_pathogenic | 0.9486 | pathogenic | -2.769 | Highly Destabilizing | 0.999 | D | 0.753 | deleterious | None | None | None | None | N |
L/C | 0.9634 | likely_pathogenic | 0.959 | pathogenic | -1.691 | Destabilizing | 1.0 | D | 0.882 | deleterious | None | None | None | None | N |
L/D | 0.9995 | likely_pathogenic | 0.9995 | pathogenic | -3.296 | Highly Destabilizing | 1.0 | D | 0.937 | deleterious | None | None | None | None | N |
L/E | 0.9962 | likely_pathogenic | 0.9951 | pathogenic | -3.008 | Highly Destabilizing | 1.0 | D | 0.918 | deleterious | None | None | None | None | N |
L/F | 0.9177 | likely_pathogenic | 0.8952 | pathogenic | -1.69 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
L/G | 0.9934 | likely_pathogenic | 0.9931 | pathogenic | -3.281 | Highly Destabilizing | 1.0 | D | 0.925 | deleterious | None | None | None | None | N |
L/H | 0.9973 | likely_pathogenic | 0.996 | pathogenic | -2.921 | Highly Destabilizing | 1.0 | D | 0.914 | deleterious | None | None | None | None | N |
L/I | 0.1952 | likely_benign | 0.1736 | benign | -1.194 | Destabilizing | 0.999 | D | 0.568 | neutral | None | None | None | None | N |
L/K | 0.9954 | likely_pathogenic | 0.9942 | pathogenic | -2.19 | Highly Destabilizing | 1.0 | D | 0.921 | deleterious | None | None | None | None | N |
L/M | 0.4583 | ambiguous | 0.4098 | ambiguous | -1.355 | Destabilizing | 1.0 | D | 0.778 | deleterious | N | 0.480085879 | None | None | N |
L/N | 0.9976 | likely_pathogenic | 0.9974 | pathogenic | -2.941 | Highly Destabilizing | 1.0 | D | 0.935 | deleterious | None | None | None | None | N |
L/P | 0.9954 | likely_pathogenic | 0.9956 | pathogenic | -1.717 | Destabilizing | 1.0 | D | 0.933 | deleterious | N | 0.508572162 | None | None | N |
L/Q | 0.9922 | likely_pathogenic | 0.9893 | pathogenic | -2.564 | Highly Destabilizing | 1.0 | D | 0.935 | deleterious | N | 0.519928467 | None | None | N |
L/R | 0.9912 | likely_pathogenic | 0.9884 | pathogenic | -2.338 | Highly Destabilizing | 1.0 | D | 0.918 | deleterious | N | 0.519928467 | None | None | N |
L/S | 0.9973 | likely_pathogenic | 0.9968 | pathogenic | -3.289 | Highly Destabilizing | 1.0 | D | 0.925 | deleterious | None | None | None | None | N |
L/T | 0.9705 | likely_pathogenic | 0.9623 | pathogenic | -2.857 | Highly Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | N |
L/V | 0.2499 | likely_benign | 0.2147 | benign | -1.717 | Destabilizing | 0.999 | D | 0.589 | neutral | N | 0.424309486 | None | None | N |
L/W | 0.9927 | likely_pathogenic | 0.9869 | pathogenic | -1.87 | Destabilizing | 1.0 | D | 0.898 | deleterious | None | None | None | None | N |
L/Y | 0.9936 | likely_pathogenic | 0.9909 | pathogenic | -1.861 | Destabilizing | 1.0 | D | 0.891 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.