Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC1820354832;54833;54834 chr2:178604080;178604079;178604078chr2:179468807;179468806;179468805
N2AB1656249909;49910;49911 chr2:178604080;178604079;178604078chr2:179468807;179468806;179468805
N2A1563547128;47129;47130 chr2:178604080;178604079;178604078chr2:179468807;179468806;179468805
N2B913827637;27638;27639 chr2:178604080;178604079;178604078chr2:179468807;179468806;179468805
Novex-1926328012;28013;28014 chr2:178604080;178604079;178604078chr2:179468807;179468806;179468805
Novex-2933028213;28214;28215 chr2:178604080;178604079;178604078chr2:179468807;179468806;179468805
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: L
  • RefSeq wild type transcript codon: CTG
  • RefSeq wild type template codon: GAC
  • Domain: Fn3-20
  • Domain position: 38
  • Structural Position: 40
  • Q(SASA): 0.0797
  • Predicted PPI site: N

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
L/P rs771560830 -1.421 1.0 N 0.933 0.71 0.80784574723 gnomAD-2.1.1 4.03E-06 None None None None N None 0 0 None 0 0 None 0 None 0 8.91E-06 0
L/P rs771560830 -1.421 1.0 N 0.933 0.71 0.80784574723 gnomAD-4.0.0 4.78005E-06 None None None None N None 0 0 None 0 0 None 0 0 8.58846E-06 0 0
L/V None None 0.999 N 0.589 0.203 0.388495093706 gnomAD-4.0.0 1.20032E-06 None None None None N None 0 0 None 0 0 None 0 0 1.3125E-06 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
L/A 0.9491 likely_pathogenic 0.9486 pathogenic -2.769 Highly Destabilizing 0.999 D 0.753 deleterious None None None None N
L/C 0.9634 likely_pathogenic 0.959 pathogenic -1.691 Destabilizing 1.0 D 0.882 deleterious None None None None N
L/D 0.9995 likely_pathogenic 0.9995 pathogenic -3.296 Highly Destabilizing 1.0 D 0.937 deleterious None None None None N
L/E 0.9962 likely_pathogenic 0.9951 pathogenic -3.008 Highly Destabilizing 1.0 D 0.918 deleterious None None None None N
L/F 0.9177 likely_pathogenic 0.8952 pathogenic -1.69 Destabilizing 1.0 D 0.821 deleterious None None None None N
L/G 0.9934 likely_pathogenic 0.9931 pathogenic -3.281 Highly Destabilizing 1.0 D 0.925 deleterious None None None None N
L/H 0.9973 likely_pathogenic 0.996 pathogenic -2.921 Highly Destabilizing 1.0 D 0.914 deleterious None None None None N
L/I 0.1952 likely_benign 0.1736 benign -1.194 Destabilizing 0.999 D 0.568 neutral None None None None N
L/K 0.9954 likely_pathogenic 0.9942 pathogenic -2.19 Highly Destabilizing 1.0 D 0.921 deleterious None None None None N
L/M 0.4583 ambiguous 0.4098 ambiguous -1.355 Destabilizing 1.0 D 0.778 deleterious N 0.480085879 None None N
L/N 0.9976 likely_pathogenic 0.9974 pathogenic -2.941 Highly Destabilizing 1.0 D 0.935 deleterious None None None None N
L/P 0.9954 likely_pathogenic 0.9956 pathogenic -1.717 Destabilizing 1.0 D 0.933 deleterious N 0.508572162 None None N
L/Q 0.9922 likely_pathogenic 0.9893 pathogenic -2.564 Highly Destabilizing 1.0 D 0.935 deleterious N 0.519928467 None None N
L/R 0.9912 likely_pathogenic 0.9884 pathogenic -2.338 Highly Destabilizing 1.0 D 0.918 deleterious N 0.519928467 None None N
L/S 0.9973 likely_pathogenic 0.9968 pathogenic -3.289 Highly Destabilizing 1.0 D 0.925 deleterious None None None None N
L/T 0.9705 likely_pathogenic 0.9623 pathogenic -2.857 Highly Destabilizing 1.0 D 0.881 deleterious None None None None N
L/V 0.2499 likely_benign 0.2147 benign -1.717 Destabilizing 0.999 D 0.589 neutral N 0.424309486 None None N
L/W 0.9927 likely_pathogenic 0.9869 pathogenic -1.87 Destabilizing 1.0 D 0.898 deleterious None None None None N
L/Y 0.9936 likely_pathogenic 0.9909 pathogenic -1.861 Destabilizing 1.0 D 0.891 deleterious None None None None N

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.