Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18208 | 54847;54848;54849 | chr2:178604065;178604064;178604063 | chr2:179468792;179468791;179468790 |
N2AB | 16567 | 49924;49925;49926 | chr2:178604065;178604064;178604063 | chr2:179468792;179468791;179468790 |
N2A | 15640 | 47143;47144;47145 | chr2:178604065;178604064;178604063 | chr2:179468792;179468791;179468790 |
N2B | 9143 | 27652;27653;27654 | chr2:178604065;178604064;178604063 | chr2:179468792;179468791;179468790 |
Novex-1 | 9268 | 28027;28028;28029 | chr2:178604065;178604064;178604063 | chr2:179468792;179468791;179468790 |
Novex-2 | 9335 | 28228;28229;28230 | chr2:178604065;178604064;178604063 | chr2:179468792;179468791;179468790 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs575533984 | -0.419 | 0.001 | N | 0.131 | 0.253 | 0.221734844693 | gnomAD-2.1.1 | 1.61E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 9.81E-05 | None | 0 | 0 | 1.65837E-04 |
E/K | rs575533984 | -0.419 | 0.001 | N | 0.131 | 0.253 | 0.221734844693 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 2.06954E-04 | 0 |
E/K | rs575533984 | -0.419 | 0.001 | N | 0.131 | 0.253 | 0.221734844693 | 1000 genomes | 1.99681E-04 | None | None | None | None | N | None | 0 | 0 | None | None | 0 | 0 | None | None | None | 1E-03 | None |
E/K | rs575533984 | -0.419 | 0.001 | N | 0.131 | 0.253 | 0.221734844693 | gnomAD-4.0.0 | 6.20001E-06 | None | None | None | None | N | None | 0 | 1.66744E-05 | None | 0 | 0 | None | 0 | 0 | 1.6961E-06 | 7.6918E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1093 | likely_benign | 0.0907 | benign | -0.7 | Destabilizing | 0.101 | N | 0.367 | neutral | N | 0.406561592 | None | None | N |
E/C | 0.7862 | likely_pathogenic | 0.7642 | pathogenic | -0.287 | Destabilizing | 0.951 | D | 0.528 | neutral | None | None | None | None | N |
E/D | 0.152 | likely_benign | 0.1289 | benign | -0.762 | Destabilizing | 0.312 | N | 0.255 | neutral | N | 0.427648941 | None | None | N |
E/F | 0.7013 | likely_pathogenic | 0.6088 | pathogenic | -0.427 | Destabilizing | 0.716 | D | 0.544 | neutral | None | None | None | None | N |
E/G | 0.2148 | likely_benign | 0.1532 | benign | -0.972 | Destabilizing | 0.523 | D | 0.467 | neutral | N | 0.404620152 | None | None | N |
E/H | 0.5432 | ambiguous | 0.4408 | ambiguous | -0.482 | Destabilizing | 0.94 | D | 0.383 | neutral | None | None | None | None | N |
E/I | 0.2248 | likely_benign | 0.1875 | benign | 0.013 | Stabilizing | 0.11 | N | 0.496 | neutral | None | None | None | None | N |
E/K | 0.2286 | likely_benign | 0.1646 | benign | -0.222 | Destabilizing | 0.001 | N | 0.131 | neutral | N | 0.355498054 | None | None | N |
E/L | 0.3222 | likely_benign | 0.2467 | benign | 0.013 | Stabilizing | 0.129 | N | 0.505 | neutral | None | None | None | None | N |
E/M | 0.371 | ambiguous | 0.2982 | benign | 0.281 | Stabilizing | 0.716 | D | 0.525 | neutral | None | None | None | None | N |
E/N | 0.3056 | likely_benign | 0.2442 | benign | -0.563 | Destabilizing | 0.593 | D | 0.24 | neutral | None | None | None | None | N |
E/P | 0.4479 | ambiguous | 0.4303 | ambiguous | -0.204 | Destabilizing | 0.816 | D | 0.441 | neutral | None | None | None | None | N |
E/Q | 0.1951 | likely_benign | 0.1487 | benign | -0.509 | Destabilizing | 0.351 | N | 0.272 | neutral | N | 0.456374337 | None | None | N |
E/R | 0.355 | ambiguous | 0.2637 | benign | 0.035 | Stabilizing | 0.264 | N | 0.212 | neutral | None | None | None | None | N |
E/S | 0.2043 | likely_benign | 0.1595 | benign | -0.783 | Destabilizing | 0.228 | N | 0.24 | neutral | None | None | None | None | N |
E/T | 0.1961 | likely_benign | 0.1477 | benign | -0.568 | Destabilizing | 0.228 | N | 0.376 | neutral | None | None | None | None | N |
E/V | 0.1335 | likely_benign | 0.1125 | benign | -0.204 | Destabilizing | 0.001 | N | 0.263 | neutral | N | 0.401731776 | None | None | N |
E/W | 0.8872 | likely_pathogenic | 0.8342 | pathogenic | -0.221 | Destabilizing | 0.983 | D | 0.552 | neutral | None | None | None | None | N |
E/Y | 0.593 | likely_pathogenic | 0.5031 | ambiguous | -0.186 | Destabilizing | 0.836 | D | 0.523 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.