Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC1821054853;54854;54855 chr2:178604059;178604058;178604057chr2:179468786;179468785;179468784
N2AB1656949930;49931;49932 chr2:178604059;178604058;178604057chr2:179468786;179468785;179468784
N2A1564247149;47150;47151 chr2:178604059;178604058;178604057chr2:179468786;179468785;179468784
N2B914527658;27659;27660 chr2:178604059;178604058;178604057chr2:179468786;179468785;179468784
Novex-1927028033;28034;28035 chr2:178604059;178604058;178604057chr2:179468786;179468785;179468784
Novex-2933728234;28235;28236 chr2:178604059;178604058;178604057chr2:179468786;179468785;179468784
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: S
  • RefSeq wild type transcript codon: AGT
  • RefSeq wild type template codon: TCA
  • Domain: Fn3-20
  • Domain position: 45
  • Structural Position: 60
  • Q(SASA): 0.2321
  • Predicted PPI site: N

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
S/I None None 0.055 N 0.363 0.196 0.436348499334 gnomAD-4.0.0 6.84561E-07 None None None None N None 0 0 None 0 0 None 0 0 8.99896E-07 0 0
S/T None None None N 0.117 0.193 0.193865811164 gnomAD-4.0.0 6.84561E-07 None None None None N None 0 0 None 0 0 None 0 0 8.99896E-07 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
S/A 0.1161 likely_benign 0.0998 benign -0.487 Destabilizing 0.003 N 0.243 neutral None None None None N
S/C 0.0927 likely_benign 0.095 benign -0.418 Destabilizing 0.56 D 0.386 neutral N 0.47278759 None None N
S/D 0.5356 ambiguous 0.479 ambiguous 0.151 Stabilizing 0.031 N 0.3 neutral None None None None N
S/E 0.6136 likely_pathogenic 0.5485 ambiguous 0.103 Stabilizing 0.061 N 0.277 neutral None None None None N
S/F 0.3708 ambiguous 0.3005 benign -0.809 Destabilizing 0.628 D 0.441 neutral None None None None N
S/G 0.0814 likely_benign 0.0681 benign -0.672 Destabilizing None N 0.121 neutral N 0.463548239 None None N
S/H 0.3969 ambiguous 0.3569 ambiguous -1.095 Destabilizing 0.628 D 0.389 neutral None None None None N
S/I 0.2441 likely_benign 0.2021 benign -0.117 Destabilizing 0.055 N 0.363 neutral N 0.516884078 None None N
S/K 0.7162 likely_pathogenic 0.6777 pathogenic -0.663 Destabilizing 0.031 N 0.275 neutral None None None None N
S/L 0.158 likely_benign 0.1287 benign -0.117 Destabilizing 0.031 N 0.271 neutral None None None None N
S/M 0.2527 likely_benign 0.2171 benign -0.045 Destabilizing 0.628 D 0.385 neutral None None None None N
S/N 0.1676 likely_benign 0.1459 benign -0.448 Destabilizing 0.024 N 0.308 neutral N 0.483288793 None None N
S/P 0.7043 likely_pathogenic 0.6732 pathogenic -0.208 Destabilizing 0.136 N 0.349 neutral None None None None N
S/Q 0.5205 ambiguous 0.457 ambiguous -0.603 Destabilizing 0.136 N 0.353 neutral None None None None N
S/R 0.6913 likely_pathogenic 0.6397 pathogenic -0.496 Destabilizing 0.106 N 0.343 neutral N 0.488908043 None None N
S/T 0.1274 likely_benign 0.1067 benign -0.513 Destabilizing None N 0.117 neutral N 0.437479145 None None N
S/V 0.2314 likely_benign 0.1881 benign -0.208 Destabilizing 0.031 N 0.279 neutral None None None None N
S/W 0.4853 ambiguous 0.4277 ambiguous -0.818 Destabilizing 0.864 D 0.411 neutral None None None None N
S/Y 0.2899 likely_benign 0.2583 benign -0.557 Destabilizing 0.628 D 0.415 neutral None None None None N

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.