Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18212 | 54859;54860;54861 | chr2:178604053;178604052;178604051 | chr2:179468780;179468779;179468778 |
N2AB | 16571 | 49936;49937;49938 | chr2:178604053;178604052;178604051 | chr2:179468780;179468779;179468778 |
N2A | 15644 | 47155;47156;47157 | chr2:178604053;178604052;178604051 | chr2:179468780;179468779;179468778 |
N2B | 9147 | 27664;27665;27666 | chr2:178604053;178604052;178604051 | chr2:179468780;179468779;179468778 |
Novex-1 | 9272 | 28039;28040;28041 | chr2:178604053;178604052;178604051 | chr2:179468780;179468779;179468778 |
Novex-2 | 9339 | 28240;28241;28242 | chr2:178604053;178604052;178604051 | chr2:179468780;179468779;179468778 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/F | rs772610346 | None | 0.999 | N | 0.55 | 0.293 | 0.474643619859 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.463 | ambiguous | 0.4493 | ambiguous | -0.742 | Destabilizing | 1.0 | D | 0.561 | neutral | None | None | None | None | N |
Y/C | 0.2179 | likely_benign | 0.2168 | benign | -0.074 | Destabilizing | 1.0 | D | 0.686 | prob.neutral | N | 0.509013957 | None | None | N |
Y/D | 0.5331 | ambiguous | 0.5336 | ambiguous | 0.745 | Stabilizing | 1.0 | D | 0.694 | prob.neutral | N | 0.421122826 | None | None | N |
Y/E | 0.7609 | likely_pathogenic | 0.7641 | pathogenic | 0.749 | Stabilizing | 1.0 | D | 0.634 | neutral | None | None | None | None | N |
Y/F | 0.1036 | likely_benign | 0.1018 | benign | -0.286 | Destabilizing | 0.999 | D | 0.55 | neutral | N | 0.489985479 | None | None | N |
Y/G | 0.4441 | ambiguous | 0.4383 | ambiguous | -0.933 | Destabilizing | 1.0 | D | 0.679 | prob.neutral | None | None | None | None | N |
Y/H | 0.2873 | likely_benign | 0.2759 | benign | 0.225 | Stabilizing | 1.0 | D | 0.597 | neutral | N | 0.447445423 | None | None | N |
Y/I | 0.4992 | ambiguous | 0.4879 | ambiguous | -0.245 | Destabilizing | 1.0 | D | 0.606 | neutral | None | None | None | None | N |
Y/K | 0.7256 | likely_pathogenic | 0.7385 | pathogenic | 0.013 | Stabilizing | 1.0 | D | 0.636 | neutral | None | None | None | None | N |
Y/L | 0.4644 | ambiguous | 0.4401 | ambiguous | -0.245 | Destabilizing | 0.999 | D | 0.583 | neutral | None | None | None | None | N |
Y/M | 0.6547 | likely_pathogenic | 0.6575 | pathogenic | -0.269 | Destabilizing | 1.0 | D | 0.641 | neutral | None | None | None | None | N |
Y/N | 0.2987 | likely_benign | 0.2908 | benign | -0.294 | Destabilizing | 1.0 | D | 0.655 | neutral | N | 0.429609023 | None | None | N |
Y/P | 0.8119 | likely_pathogenic | 0.8119 | pathogenic | -0.394 | Destabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | N |
Y/Q | 0.5982 | likely_pathogenic | 0.5859 | pathogenic | -0.187 | Destabilizing | 1.0 | D | 0.617 | neutral | None | None | None | None | N |
Y/R | 0.4948 | ambiguous | 0.492 | ambiguous | 0.217 | Stabilizing | 1.0 | D | 0.658 | neutral | None | None | None | None | N |
Y/S | 0.269 | likely_benign | 0.2585 | benign | -0.689 | Destabilizing | 1.0 | D | 0.641 | neutral | N | 0.401208914 | None | None | N |
Y/T | 0.4736 | ambiguous | 0.4815 | ambiguous | -0.596 | Destabilizing | 1.0 | D | 0.632 | neutral | None | None | None | None | N |
Y/V | 0.3689 | ambiguous | 0.3599 | ambiguous | -0.394 | Destabilizing | 1.0 | D | 0.57 | neutral | None | None | None | None | N |
Y/W | 0.4124 | ambiguous | 0.4149 | ambiguous | -0.361 | Destabilizing | 1.0 | D | 0.625 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.