Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18230 | 54913;54914;54915 | chr2:178603999;178603998;178603997 | chr2:179468726;179468725;179468724 |
N2AB | 16589 | 49990;49991;49992 | chr2:178603999;178603998;178603997 | chr2:179468726;179468725;179468724 |
N2A | 15662 | 47209;47210;47211 | chr2:178603999;178603998;178603997 | chr2:179468726;179468725;179468724 |
N2B | 9165 | 27718;27719;27720 | chr2:178603999;178603998;178603997 | chr2:179468726;179468725;179468724 |
Novex-1 | 9290 | 28093;28094;28095 | chr2:178603999;178603998;178603997 | chr2:179468726;179468725;179468724 |
Novex-2 | 9357 | 28294;28295;28296 | chr2:178603999;178603998;178603997 | chr2:179468726;179468725;179468724 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/V | None | None | 0.999 | N | 0.849 | 0.473 | 0.500176316166 | gnomAD-4.0.0 | 3.60097E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.9375E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3804 | ambiguous | 0.2499 | benign | -0.969 | Destabilizing | 0.996 | D | 0.575 | neutral | N | 0.501685339 | None | None | N |
E/C | 0.9177 | likely_pathogenic | 0.9062 | pathogenic | -0.429 | Destabilizing | 1.0 | D | 0.862 | deleterious | None | None | None | None | N |
E/D | 0.36 | ambiguous | 0.2249 | benign | -1.144 | Destabilizing | 0.996 | D | 0.398 | neutral | N | 0.473209344 | None | None | N |
E/F | 0.9394 | likely_pathogenic | 0.8859 | pathogenic | -0.232 | Destabilizing | 1.0 | D | 0.889 | deleterious | None | None | None | None | N |
E/G | 0.5524 | ambiguous | 0.4046 | ambiguous | -1.398 | Destabilizing | 0.999 | D | 0.755 | deleterious | N | 0.480464273 | None | None | N |
E/H | 0.7713 | likely_pathogenic | 0.6604 | pathogenic | -0.479 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | N |
E/I | 0.6567 | likely_pathogenic | 0.5165 | ambiguous | 0.232 | Stabilizing | 1.0 | D | 0.907 | deleterious | None | None | None | None | N |
E/K | 0.5676 | likely_pathogenic | 0.4409 | ambiguous | -0.428 | Destabilizing | 0.992 | D | 0.455 | neutral | N | 0.49143106 | None | None | N |
E/L | 0.7668 | likely_pathogenic | 0.6342 | pathogenic | 0.232 | Stabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
E/M | 0.7439 | likely_pathogenic | 0.6265 | pathogenic | 0.793 | Stabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | N |
E/N | 0.6065 | likely_pathogenic | 0.4488 | ambiguous | -1.076 | Destabilizing | 1.0 | D | 0.683 | prob.neutral | None | None | None | None | N |
E/P | 0.9381 | likely_pathogenic | 0.877 | pathogenic | -0.148 | Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
E/Q | 0.2602 | likely_benign | 0.1978 | benign | -0.873 | Destabilizing | 0.957 | D | 0.229 | neutral | N | 0.46995971 | None | None | N |
E/R | 0.6424 | likely_pathogenic | 0.529 | ambiguous | -0.246 | Destabilizing | 0.999 | D | 0.683 | prob.neutral | None | None | None | None | N |
E/S | 0.4034 | ambiguous | 0.2843 | benign | -1.514 | Destabilizing | 0.997 | D | 0.544 | neutral | None | None | None | None | N |
E/T | 0.3776 | ambiguous | 0.2674 | benign | -1.118 | Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | N |
E/V | 0.4315 | ambiguous | 0.3138 | benign | -0.148 | Destabilizing | 0.999 | D | 0.849 | deleterious | N | 0.515636072 | None | None | N |
E/W | 0.9841 | likely_pathogenic | 0.9658 | pathogenic | 0.087 | Stabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | N |
E/Y | 0.8852 | likely_pathogenic | 0.7986 | pathogenic | 0.095 | Stabilizing | 1.0 | D | 0.903 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.