Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18234 | 54925;54926;54927 | chr2:178603987;178603986;178603985 | chr2:179468714;179468713;179468712 |
N2AB | 16593 | 50002;50003;50004 | chr2:178603987;178603986;178603985 | chr2:179468714;179468713;179468712 |
N2A | 15666 | 47221;47222;47223 | chr2:178603987;178603986;178603985 | chr2:179468714;179468713;179468712 |
N2B | 9169 | 27730;27731;27732 | chr2:178603987;178603986;178603985 | chr2:179468714;179468713;179468712 |
Novex-1 | 9294 | 28105;28106;28107 | chr2:178603987;178603986;178603985 | chr2:179468714;179468713;179468712 |
Novex-2 | 9361 | 28306;28307;28308 | chr2:178603987;178603986;178603985 | chr2:179468714;179468713;179468712 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/T | rs1060500416 | None | 0.891 | N | 0.485 | 0.182 | 0.305410167561 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.42E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
P/T | rs1060500416 | None | 0.891 | N | 0.485 | 0.182 | 0.305410167561 | gnomAD-4.0.0 | 6.58371E-06 | None | None | None | None | N | None | 2.41639E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1797 | likely_benign | 0.1052 | benign | -1.063 | Destabilizing | 0.625 | D | 0.427 | neutral | N | 0.45881721 | None | None | N |
P/C | 0.7545 | likely_pathogenic | 0.6038 | pathogenic | -0.904 | Destabilizing | 0.998 | D | 0.571 | neutral | None | None | None | None | N |
P/D | 0.818 | likely_pathogenic | 0.6531 | pathogenic | -0.445 | Destabilizing | 0.991 | D | 0.588 | neutral | None | None | None | None | N |
P/E | 0.6134 | likely_pathogenic | 0.42 | ambiguous | -0.473 | Destabilizing | 0.971 | D | 0.546 | neutral | None | None | None | None | N |
P/F | 0.7864 | likely_pathogenic | 0.5251 | ambiguous | -0.842 | Destabilizing | 0.949 | D | 0.592 | neutral | None | None | None | None | N |
P/G | 0.469 | ambiguous | 0.2945 | benign | -1.33 | Destabilizing | 0.971 | D | 0.526 | neutral | None | None | None | None | N |
P/H | 0.5179 | ambiguous | 0.2856 | benign | -0.74 | Destabilizing | 0.997 | D | 0.567 | neutral | N | 0.471285075 | None | None | N |
P/I | 0.5495 | ambiguous | 0.3103 | benign | -0.458 | Destabilizing | 0.525 | D | 0.48 | neutral | None | None | None | None | N |
P/K | 0.7021 | likely_pathogenic | 0.4954 | ambiguous | -0.84 | Destabilizing | 0.915 | D | 0.496 | neutral | None | None | None | None | N |
P/L | 0.2268 | likely_benign | 0.1044 | benign | -0.458 | Destabilizing | 0.002 | N | 0.495 | neutral | N | 0.426379504 | None | None | N |
P/M | 0.5053 | ambiguous | 0.2986 | benign | -0.492 | Destabilizing | 0.949 | D | 0.593 | neutral | None | None | None | None | N |
P/N | 0.5754 | likely_pathogenic | 0.3836 | ambiguous | -0.641 | Destabilizing | 0.991 | D | 0.601 | neutral | None | None | None | None | N |
P/Q | 0.3514 | ambiguous | 0.1934 | benign | -0.791 | Destabilizing | 0.991 | D | 0.584 | neutral | None | None | None | None | N |
P/R | 0.5974 | likely_pathogenic | 0.3555 | ambiguous | -0.349 | Destabilizing | 0.966 | D | 0.595 | neutral | N | 0.441962245 | None | None | N |
P/S | 0.2632 | likely_benign | 0.1457 | benign | -1.187 | Destabilizing | 0.891 | D | 0.471 | neutral | N | 0.424317847 | None | None | N |
P/T | 0.1984 | likely_benign | 0.114 | benign | -1.093 | Destabilizing | 0.891 | D | 0.485 | neutral | N | 0.373176951 | None | None | N |
P/V | 0.3795 | ambiguous | 0.2059 | benign | -0.623 | Destabilizing | 0.525 | D | 0.439 | neutral | None | None | None | None | N |
P/W | 0.8855 | likely_pathogenic | 0.685 | pathogenic | -0.951 | Destabilizing | 0.998 | D | 0.579 | neutral | None | None | None | None | N |
P/Y | 0.7648 | likely_pathogenic | 0.5146 | ambiguous | -0.662 | Destabilizing | 0.974 | D | 0.589 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.