Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18251 | 54976;54977;54978 | chr2:178603936;178603935;178603934 | chr2:179468663;179468662;179468661 |
N2AB | 16610 | 50053;50054;50055 | chr2:178603936;178603935;178603934 | chr2:179468663;179468662;179468661 |
N2A | 15683 | 47272;47273;47274 | chr2:178603936;178603935;178603934 | chr2:179468663;179468662;179468661 |
N2B | 9186 | 27781;27782;27783 | chr2:178603936;178603935;178603934 | chr2:179468663;179468662;179468661 |
Novex-1 | 9311 | 28156;28157;28158 | chr2:178603936;178603935;178603934 | chr2:179468663;179468662;179468661 |
Novex-2 | 9378 | 28357;28358;28359 | chr2:178603936;178603935;178603934 | chr2:179468663;179468662;179468661 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | None | None | 0.669 | N | 0.249 | 0.183 | 0.250579442822 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.5324 | ambiguous | 0.5587 | ambiguous | -0.807 | Destabilizing | 0.998 | D | 0.262 | neutral | None | None | None | None | I |
A/D | 0.4744 | ambiguous | 0.4804 | ambiguous | -0.639 | Destabilizing | 0.934 | D | 0.469 | neutral | N | 0.461588156 | None | None | I |
A/E | 0.3411 | ambiguous | 0.3564 | ambiguous | -0.804 | Destabilizing | 0.842 | D | 0.365 | neutral | None | None | None | None | I |
A/F | 0.477 | ambiguous | 0.4152 | ambiguous | -0.97 | Destabilizing | 0.949 | D | 0.487 | neutral | None | None | None | None | I |
A/G | 0.2074 | likely_benign | 0.1989 | benign | -0.245 | Destabilizing | 0.801 | D | 0.232 | neutral | N | 0.513550198 | None | None | I |
A/H | 0.5059 | ambiguous | 0.5232 | ambiguous | -0.242 | Destabilizing | 0.998 | D | 0.454 | neutral | None | None | None | None | I |
A/I | 0.2329 | likely_benign | 0.1873 | benign | -0.433 | Destabilizing | 0.016 | N | 0.181 | neutral | None | None | None | None | I |
A/K | 0.4382 | ambiguous | 0.4691 | ambiguous | -0.52 | Destabilizing | 0.842 | D | 0.361 | neutral | None | None | None | None | I |
A/L | 0.1704 | likely_benign | 0.1423 | benign | -0.433 | Destabilizing | 0.016 | N | 0.189 | neutral | None | None | None | None | I |
A/M | 0.2172 | likely_benign | 0.1811 | benign | -0.427 | Destabilizing | 0.949 | D | 0.356 | neutral | None | None | None | None | I |
A/N | 0.31 | likely_benign | 0.2888 | benign | -0.273 | Destabilizing | 0.949 | D | 0.484 | neutral | None | None | None | None | I |
A/P | 0.5212 | ambiguous | 0.5467 | ambiguous | -0.342 | Destabilizing | 0.966 | D | 0.373 | neutral | N | 0.506341798 | None | None | I |
A/Q | 0.3152 | likely_benign | 0.335 | benign | -0.588 | Destabilizing | 0.974 | D | 0.365 | neutral | None | None | None | None | I |
A/R | 0.4124 | ambiguous | 0.4524 | ambiguous | -0.028 | Destabilizing | 0.974 | D | 0.364 | neutral | None | None | None | None | I |
A/S | 0.1173 | likely_benign | 0.1206 | benign | -0.423 | Destabilizing | 0.062 | N | 0.089 | neutral | N | 0.444079831 | None | None | I |
A/T | 0.1021 | likely_benign | 0.0963 | benign | -0.52 | Destabilizing | 0.669 | D | 0.249 | neutral | N | 0.503088062 | None | None | I |
A/V | 0.1285 | likely_benign | 0.1093 | benign | -0.342 | Destabilizing | 0.454 | N | 0.293 | neutral | N | 0.499549111 | None | None | I |
A/W | 0.8371 | likely_pathogenic | 0.8297 | pathogenic | -1.063 | Destabilizing | 0.998 | D | 0.577 | neutral | None | None | None | None | I |
A/Y | 0.5654 | likely_pathogenic | 0.5516 | ambiguous | -0.731 | Destabilizing | 0.974 | D | 0.485 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.