Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18260 | 55003;55004;55005 | chr2:178603909;178603908;178603907 | chr2:179468636;179468635;179468634 |
N2AB | 16619 | 50080;50081;50082 | chr2:178603909;178603908;178603907 | chr2:179468636;179468635;179468634 |
N2A | 15692 | 47299;47300;47301 | chr2:178603909;178603908;178603907 | chr2:179468636;179468635;179468634 |
N2B | 9195 | 27808;27809;27810 | chr2:178603909;178603908;178603907 | chr2:179468636;179468635;179468634 |
Novex-1 | 9320 | 28183;28184;28185 | chr2:178603909;178603908;178603907 | chr2:179468636;179468635;179468634 |
Novex-2 | 9387 | 28384;28385;28386 | chr2:178603909;178603908;178603907 | chr2:179468636;179468635;179468634 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/T | None | None | 0.986 | N | 0.643 | 0.271 | 0.355242300401 | gnomAD-4.0.0 | 1.59858E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.87467E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0742 | likely_benign | 0.0637 | benign | -1.728 | Destabilizing | 0.214 | N | 0.303 | neutral | N | 0.47980577 | None | None | N |
P/C | 0.5529 | ambiguous | 0.4954 | ambiguous | -1.066 | Destabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | N |
P/D | 0.7028 | likely_pathogenic | 0.6457 | pathogenic | -1.547 | Destabilizing | 0.995 | D | 0.595 | neutral | None | None | None | None | N |
P/E | 0.441 | ambiguous | 0.3733 | ambiguous | -1.509 | Destabilizing | 0.995 | D | 0.561 | neutral | None | None | None | None | N |
P/F | 0.6918 | likely_pathogenic | 0.5735 | pathogenic | -1.29 | Destabilizing | 0.995 | D | 0.8 | deleterious | None | None | None | None | N |
P/G | 0.4953 | ambiguous | 0.3969 | ambiguous | -2.09 | Highly Destabilizing | 0.964 | D | 0.645 | neutral | None | None | None | None | N |
P/H | 0.5622 | ambiguous | 0.4819 | ambiguous | -1.569 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | N |
P/I | 0.2791 | likely_benign | 0.1998 | benign | -0.81 | Destabilizing | 0.455 | N | 0.539 | neutral | None | None | None | None | N |
P/K | 0.6696 | likely_pathogenic | 0.618 | pathogenic | -1.238 | Destabilizing | 0.995 | D | 0.547 | neutral | None | None | None | None | N |
P/L | 0.1913 | likely_benign | 0.1484 | benign | -0.81 | Destabilizing | 0.91 | D | 0.675 | prob.neutral | N | 0.46987062 | None | None | N |
P/M | 0.3774 | ambiguous | 0.3019 | benign | -0.606 | Destabilizing | 0.999 | D | 0.701 | prob.delet. | None | None | None | None | N |
P/N | 0.627 | likely_pathogenic | 0.5492 | ambiguous | -1.081 | Destabilizing | 0.998 | D | 0.735 | deleterious | None | None | None | None | N |
P/Q | 0.4098 | ambiguous | 0.3491 | ambiguous | -1.228 | Destabilizing | 0.998 | D | 0.596 | neutral | N | 0.499143824 | None | None | N |
P/R | 0.5674 | likely_pathogenic | 0.4911 | ambiguous | -0.744 | Destabilizing | 0.993 | D | 0.729 | deleterious | N | 0.51024664 | None | None | N |
P/S | 0.2188 | likely_benign | 0.1764 | benign | -1.668 | Destabilizing | 0.91 | D | 0.607 | neutral | N | 0.519748238 | None | None | N |
P/T | 0.1554 | likely_benign | 0.1303 | benign | -1.516 | Destabilizing | 0.986 | D | 0.643 | neutral | N | 0.511859474 | None | None | N |
P/V | 0.1821 | likely_benign | 0.1371 | benign | -1.083 | Destabilizing | 0.931 | D | 0.584 | neutral | None | None | None | None | N |
P/W | 0.8754 | likely_pathogenic | 0.808 | pathogenic | -1.507 | Destabilizing | 1.0 | D | 0.705 | prob.delet. | None | None | None | None | N |
P/Y | 0.7205 | likely_pathogenic | 0.6279 | pathogenic | -1.209 | Destabilizing | 0.998 | D | 0.781 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.