Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18264 | 55015;55016;55017 | chr2:178603897;178603896;178603895 | chr2:179468624;179468623;179468622 |
N2AB | 16623 | 50092;50093;50094 | chr2:178603897;178603896;178603895 | chr2:179468624;179468623;179468622 |
N2A | 15696 | 47311;47312;47313 | chr2:178603897;178603896;178603895 | chr2:179468624;179468623;179468622 |
N2B | 9199 | 27820;27821;27822 | chr2:178603897;178603896;178603895 | chr2:179468624;179468623;179468622 |
Novex-1 | 9324 | 28195;28196;28197 | chr2:178603897;178603896;178603895 | chr2:179468624;179468623;179468622 |
Novex-2 | 9391 | 28396;28397;28398 | chr2:178603897;178603896;178603895 | chr2:179468624;179468623;179468622 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | None | None | None | N | 0.118 | 0.095 | 0.104622674875 | gnomAD-4.0.0 | 1.60669E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.44329E-05 | 0 |
E/K | rs1253287416 | -0.696 | 0.001 | N | 0.398 | 0.079 | 0.186928172975 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.93E-06 | 0 |
E/K | rs1253287416 | -0.696 | 0.001 | N | 0.398 | 0.079 | 0.186928172975 | gnomAD-4.0.0 | 4.12128E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.41686E-06 | 0 | 0 |
E/Q | rs1253287416 | None | 0.007 | N | 0.346 | 0.067 | 0.17258766438 | gnomAD-4.0.0 | 2.74752E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.53344E-05 | None | 0 | 0 | 9.02811E-07 | 1.16566E-05 | 1.6645E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.0595 | likely_benign | 0.0594 | benign | -0.531 | Destabilizing | None | N | 0.118 | neutral | N | 0.445037049 | None | None | N |
E/C | 0.5289 | ambiguous | 0.4887 | ambiguous | -0.456 | Destabilizing | 0.131 | N | 0.472 | neutral | None | None | None | None | N |
E/D | 0.2779 | likely_benign | 0.2203 | benign | -1.198 | Destabilizing | 0.007 | N | 0.365 | neutral | N | 0.42731808 | None | None | N |
E/F | 0.5693 | likely_pathogenic | 0.5147 | ambiguous | 0.18 | Stabilizing | 0.004 | N | 0.467 | neutral | None | None | None | None | N |
E/G | 0.2461 | likely_benign | 0.1796 | benign | -0.926 | Destabilizing | 0.001 | N | 0.354 | neutral | N | 0.445903841 | None | None | N |
E/H | 0.4743 | ambiguous | 0.3937 | ambiguous | -0.132 | Destabilizing | 0.069 | N | 0.45 | neutral | None | None | None | None | N |
E/I | 0.1578 | likely_benign | 0.1536 | benign | 0.55 | Stabilizing | 0.004 | N | 0.429 | neutral | None | None | None | None | N |
E/K | 0.272 | likely_benign | 0.1952 | benign | -0.693 | Destabilizing | 0.001 | N | 0.398 | neutral | N | 0.444863691 | None | None | N |
E/L | 0.2765 | likely_benign | 0.2247 | benign | 0.55 | Stabilizing | 0.002 | N | 0.393 | neutral | None | None | None | None | N |
E/M | 0.2593 | likely_benign | 0.2423 | benign | 0.835 | Stabilizing | 0.131 | N | 0.513 | neutral | None | None | None | None | N |
E/N | 0.4009 | ambiguous | 0.3409 | ambiguous | -1.209 | Destabilizing | 0.009 | N | 0.345 | neutral | None | None | None | None | N |
E/P | 0.9077 | likely_pathogenic | 0.8505 | pathogenic | 0.212 | Stabilizing | 0.009 | N | 0.467 | neutral | None | None | None | None | N |
E/Q | 0.1597 | likely_benign | 0.1306 | benign | -1.015 | Destabilizing | 0.007 | N | 0.346 | neutral | N | 0.444516974 | None | None | N |
E/R | 0.3579 | ambiguous | 0.2633 | benign | -0.376 | Destabilizing | None | N | 0.162 | neutral | None | None | None | None | N |
E/S | 0.1596 | likely_benign | 0.1461 | benign | -1.5 | Destabilizing | 0.002 | N | 0.373 | neutral | None | None | None | None | N |
E/T | 0.1211 | likely_benign | 0.1124 | benign | -1.174 | Destabilizing | None | N | 0.178 | neutral | None | None | None | None | N |
E/V | 0.0811 | likely_benign | 0.0845 | benign | 0.212 | Stabilizing | 0.001 | N | 0.355 | neutral | N | 0.443823541 | None | None | N |
E/W | 0.8904 | likely_pathogenic | 0.827 | pathogenic | 0.367 | Stabilizing | 0.131 | N | 0.457 | neutral | None | None | None | None | N |
E/Y | 0.5224 | ambiguous | 0.4709 | ambiguous | 0.404 | Stabilizing | None | N | 0.235 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.