Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18318 | 55177;55178;55179 | chr2:178602450;178602449;178602448 | chr2:179467177;179467176;179467175 |
N2AB | 16677 | 50254;50255;50256 | chr2:178602450;178602449;178602448 | chr2:179467177;179467176;179467175 |
N2A | 15750 | 47473;47474;47475 | chr2:178602450;178602449;178602448 | chr2:179467177;179467176;179467175 |
N2B | 9253 | 27982;27983;27984 | chr2:178602450;178602449;178602448 | chr2:179467177;179467176;179467175 |
Novex-1 | 9378 | 28357;28358;28359 | chr2:178602450;178602449;178602448 | chr2:179467177;179467176;179467175 |
Novex-2 | 9445 | 28558;28559;28560 | chr2:178602450;178602449;178602448 | chr2:179467177;179467176;179467175 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/E | rs951863461 | None | 0.37 | N | 0.358 | 0.061 | 0.159798565429 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
D/E | rs951863461 | None | 0.37 | N | 0.358 | 0.061 | 0.159798565429 | gnomAD-4.0.0 | 2.5666E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.79294E-06 | 0 | 0 |
D/Y | None | None | 1.0 | N | 0.615 | 0.462 | 0.686914373969 | gnomAD-4.0.0 | 1.5942E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.7908E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1078 | likely_benign | 0.1023 | benign | -0.332 | Destabilizing | 0.978 | D | 0.507 | neutral | N | 0.504936288 | None | None | N |
D/C | 0.4436 | ambiguous | 0.4671 | ambiguous | -0.064 | Destabilizing | 1.0 | D | 0.665 | neutral | None | None | None | None | N |
D/E | 0.1039 | likely_benign | 0.0877 | benign | -0.286 | Destabilizing | 0.37 | N | 0.358 | neutral | N | 0.41800795 | None | None | N |
D/F | 0.4093 | ambiguous | 0.4447 | ambiguous | -0.249 | Destabilizing | 1.0 | D | 0.612 | neutral | None | None | None | None | N |
D/G | 0.1235 | likely_benign | 0.1304 | benign | -0.528 | Destabilizing | 0.121 | N | 0.397 | neutral | N | 0.481269995 | None | None | N |
D/H | 0.2233 | likely_benign | 0.2312 | benign | -0.052 | Destabilizing | 1.0 | D | 0.481 | neutral | N | 0.513345128 | None | None | N |
D/I | 0.2131 | likely_benign | 0.2038 | benign | 0.138 | Stabilizing | 0.999 | D | 0.626 | neutral | None | None | None | None | N |
D/K | 0.2569 | likely_benign | 0.2576 | benign | 0.166 | Stabilizing | 0.995 | D | 0.456 | neutral | None | None | None | None | N |
D/L | 0.2361 | likely_benign | 0.2423 | benign | 0.138 | Stabilizing | 0.998 | D | 0.636 | neutral | None | None | None | None | N |
D/M | 0.4271 | ambiguous | 0.4194 | ambiguous | 0.24 | Stabilizing | 1.0 | D | 0.641 | neutral | None | None | None | None | N |
D/N | 0.0932 | likely_benign | 0.0985 | benign | -0.069 | Destabilizing | 0.997 | D | 0.45 | neutral | N | 0.495778087 | None | None | N |
D/P | 0.632 | likely_pathogenic | 0.6824 | pathogenic | 0.003 | Stabilizing | 0.999 | D | 0.475 | neutral | None | None | None | None | N |
D/Q | 0.218 | likely_benign | 0.2036 | benign | -0.037 | Destabilizing | 0.995 | D | 0.477 | neutral | None | None | None | None | N |
D/R | 0.293 | likely_benign | 0.3113 | benign | 0.383 | Stabilizing | 0.995 | D | 0.557 | neutral | None | None | None | None | N |
D/S | 0.099 | likely_benign | 0.1016 | benign | -0.207 | Destabilizing | 0.983 | D | 0.455 | neutral | None | None | None | None | N |
D/T | 0.1533 | likely_benign | 0.1406 | benign | -0.056 | Destabilizing | 0.998 | D | 0.484 | neutral | None | None | None | None | N |
D/V | 0.1273 | likely_benign | 0.1238 | benign | 0.003 | Stabilizing | 0.997 | D | 0.645 | neutral | N | 0.492335137 | None | None | N |
D/W | 0.773 | likely_pathogenic | 0.8006 | pathogenic | -0.112 | Destabilizing | 1.0 | D | 0.659 | neutral | None | None | None | None | N |
D/Y | 0.1803 | likely_benign | 0.2088 | benign | -0.016 | Destabilizing | 1.0 | D | 0.615 | neutral | N | 0.475803011 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.