Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18333 | 55222;55223;55224 | chr2:178602405;178602404;178602403 | chr2:179467132;179467131;179467130 |
N2AB | 16692 | 50299;50300;50301 | chr2:178602405;178602404;178602403 | chr2:179467132;179467131;179467130 |
N2A | 15765 | 47518;47519;47520 | chr2:178602405;178602404;178602403 | chr2:179467132;179467131;179467130 |
N2B | 9268 | 28027;28028;28029 | chr2:178602405;178602404;178602403 | chr2:179467132;179467131;179467130 |
Novex-1 | 9393 | 28402;28403;28404 | chr2:178602405;178602404;178602403 | chr2:179467132;179467131;179467130 |
Novex-2 | 9460 | 28603;28604;28605 | chr2:178602405;178602404;178602403 | chr2:179467132;179467131;179467130 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs764950995 | -0.988 | 0.961 | N | 0.413 | 0.202 | 0.266843984389 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
E/D | rs764950995 | -0.988 | 0.961 | N | 0.413 | 0.202 | 0.266843984389 | gnomAD-3.1.2 | 4.61E-05 | None | None | None | None | N | None | 2.42E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 8.83E-05 | 0 | 0 |
E/D | rs764950995 | -0.988 | 0.961 | N | 0.413 | 0.202 | 0.266843984389 | gnomAD-4.0.0 | 6.13903E-05 | None | None | None | None | N | None | 1.3364E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 8.31051E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1662 | likely_benign | 0.1777 | benign | -0.874 | Destabilizing | 0.835 | D | 0.48 | neutral | N | 0.509360673 | None | None | N |
E/C | 0.7659 | likely_pathogenic | 0.7991 | pathogenic | -0.444 | Destabilizing | 1.0 | D | 0.688 | prob.neutral | None | None | None | None | N |
E/D | 0.1375 | likely_benign | 0.1482 | benign | -0.758 | Destabilizing | 0.961 | D | 0.413 | neutral | N | 0.484650874 | None | None | N |
E/F | 0.6906 | likely_pathogenic | 0.7217 | pathogenic | -0.307 | Destabilizing | 0.996 | D | 0.719 | prob.delet. | None | None | None | None | N |
E/G | 0.2254 | likely_benign | 0.2468 | benign | -1.182 | Destabilizing | 0.961 | D | 0.559 | neutral | N | 0.471306332 | None | None | N |
E/H | 0.3777 | ambiguous | 0.3694 | ambiguous | -0.265 | Destabilizing | 1.0 | D | 0.537 | neutral | None | None | None | None | N |
E/I | 0.3513 | ambiguous | 0.3537 | ambiguous | -0.049 | Destabilizing | 0.983 | D | 0.646 | neutral | None | None | None | None | N |
E/K | 0.1781 | likely_benign | 0.1744 | benign | -0.345 | Destabilizing | 0.961 | D | 0.387 | neutral | N | 0.471727792 | None | None | N |
E/L | 0.4474 | ambiguous | 0.4411 | ambiguous | -0.049 | Destabilizing | 0.942 | D | 0.583 | neutral | None | None | None | None | N |
E/M | 0.4613 | ambiguous | 0.4829 | ambiguous | 0.225 | Stabilizing | 0.999 | D | 0.702 | prob.neutral | None | None | None | None | N |
E/N | 0.2325 | likely_benign | 0.2476 | benign | -0.824 | Destabilizing | 0.991 | D | 0.513 | neutral | None | None | None | None | N |
E/P | 0.9225 | likely_pathogenic | 0.9275 | pathogenic | -0.304 | Destabilizing | 0.996 | D | 0.657 | neutral | None | None | None | None | N |
E/Q | 0.1348 | likely_benign | 0.1233 | benign | -0.727 | Destabilizing | 0.994 | D | 0.539 | neutral | N | 0.504512214 | None | None | N |
E/R | 0.2892 | likely_benign | 0.2848 | benign | 0.047 | Stabilizing | 0.996 | D | 0.527 | neutral | None | None | None | None | N |
E/S | 0.1685 | likely_benign | 0.1719 | benign | -1.072 | Destabilizing | 0.559 | D | 0.438 | neutral | None | None | None | None | N |
E/T | 0.1819 | likely_benign | 0.1823 | benign | -0.817 | Destabilizing | 0.942 | D | 0.503 | neutral | None | None | None | None | N |
E/V | 0.2226 | likely_benign | 0.2189 | benign | -0.304 | Destabilizing | 0.433 | N | 0.439 | neutral | N | 0.517230795 | None | None | N |
E/W | 0.8778 | likely_pathogenic | 0.8931 | pathogenic | 0.01 | Stabilizing | 1.0 | D | 0.638 | neutral | None | None | None | None | N |
E/Y | 0.5692 | likely_pathogenic | 0.5957 | pathogenic | -0.04 | Destabilizing | 0.999 | D | 0.719 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.