Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18335 | 55228;55229;55230 | chr2:178602399;178602398;178602397 | chr2:179467126;179467125;179467124 |
N2AB | 16694 | 50305;50306;50307 | chr2:178602399;178602398;178602397 | chr2:179467126;179467125;179467124 |
N2A | 15767 | 47524;47525;47526 | chr2:178602399;178602398;178602397 | chr2:179467126;179467125;179467124 |
N2B | 9270 | 28033;28034;28035 | chr2:178602399;178602398;178602397 | chr2:179467126;179467125;179467124 |
Novex-1 | 9395 | 28408;28409;28410 | chr2:178602399;178602398;178602397 | chr2:179467126;179467125;179467124 |
Novex-2 | 9462 | 28609;28610;28611 | chr2:178602399;178602398;178602397 | chr2:179467126;179467125;179467124 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.91 | N | 0.439 | 0.162 | 0.52437609879 | gnomAD-4.0.0 | 1.59337E-06 | None | None | None | None | N | None | 5.67279E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1727 | likely_benign | 0.1555 | benign | -0.576 | Destabilizing | 0.91 | D | 0.439 | neutral | N | 0.449467008 | None | None | N |
V/C | 0.6772 | likely_pathogenic | 0.6571 | pathogenic | -0.706 | Destabilizing | 1.0 | D | 0.667 | neutral | None | None | None | None | N |
V/D | 0.2957 | likely_benign | 0.2699 | benign | -0.333 | Destabilizing | 0.996 | D | 0.714 | prob.delet. | None | None | None | None | N |
V/E | 0.2259 | likely_benign | 0.2013 | benign | -0.438 | Destabilizing | 0.994 | D | 0.674 | neutral | N | 0.446445345 | None | None | N |
V/F | 0.1642 | likely_benign | 0.174 | benign | -0.736 | Destabilizing | 0.999 | D | 0.689 | prob.neutral | None | None | None | None | N |
V/G | 0.2637 | likely_benign | 0.2609 | benign | -0.727 | Destabilizing | 0.98 | D | 0.672 | neutral | N | 0.481040708 | None | None | N |
V/H | 0.4342 | ambiguous | 0.4203 | ambiguous | -0.292 | Destabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | N |
V/I | 0.0734 | likely_benign | 0.0725 | benign | -0.324 | Destabilizing | 0.931 | D | 0.526 | neutral | None | None | None | None | N |
V/K | 0.2612 | likely_benign | 0.2523 | benign | -0.557 | Destabilizing | 0.991 | D | 0.677 | prob.neutral | None | None | None | None | N |
V/L | 0.1648 | likely_benign | 0.1556 | benign | -0.324 | Destabilizing | 0.91 | D | 0.466 | neutral | N | 0.434209554 | None | None | N |
V/M | 0.1274 | likely_benign | 0.1206 | benign | -0.366 | Destabilizing | 0.998 | D | 0.572 | neutral | N | 0.480347275 | None | None | N |
V/N | 0.208 | likely_benign | 0.19 | benign | -0.308 | Destabilizing | 0.996 | D | 0.751 | deleterious | None | None | None | None | N |
V/P | 0.6219 | likely_pathogenic | 0.542 | ambiguous | -0.373 | Destabilizing | 0.999 | D | 0.741 | deleterious | None | None | None | None | N |
V/Q | 0.255 | likely_benign | 0.2367 | benign | -0.541 | Destabilizing | 0.999 | D | 0.744 | deleterious | None | None | None | None | N |
V/R | 0.2441 | likely_benign | 0.2354 | benign | -0.033 | Destabilizing | 0.996 | D | 0.755 | deleterious | None | None | None | None | N |
V/S | 0.181 | likely_benign | 0.168 | benign | -0.691 | Destabilizing | 0.942 | D | 0.602 | neutral | None | None | None | None | N |
V/T | 0.1143 | likely_benign | 0.0963 | benign | -0.692 | Destabilizing | 0.155 | N | 0.237 | neutral | None | None | None | None | N |
V/W | 0.7706 | likely_pathogenic | 0.7531 | pathogenic | -0.818 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | N |
V/Y | 0.506 | ambiguous | 0.4954 | ambiguous | -0.525 | Destabilizing | 0.999 | D | 0.69 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.