Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18344 | 55255;55256;55257 | chr2:178602372;178602371;178602370 | chr2:179467099;179467098;179467097 |
N2AB | 16703 | 50332;50333;50334 | chr2:178602372;178602371;178602370 | chr2:179467099;179467098;179467097 |
N2A | 15776 | 47551;47552;47553 | chr2:178602372;178602371;178602370 | chr2:179467099;179467098;179467097 |
N2B | 9279 | 28060;28061;28062 | chr2:178602372;178602371;178602370 | chr2:179467099;179467098;179467097 |
Novex-1 | 9404 | 28435;28436;28437 | chr2:178602372;178602371;178602370 | chr2:179467099;179467098;179467097 |
Novex-2 | 9471 | 28636;28637;28638 | chr2:178602372;178602371;178602370 | chr2:179467099;179467098;179467097 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | None | None | 0.217 | N | 0.18 | 0.089 | 0.283761946502 | gnomAD-4.0.0 | 1.59322E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86162E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.4743 | ambiguous | 0.5348 | ambiguous | -0.741 | Destabilizing | 0.996 | D | 0.595 | neutral | None | None | None | None | N |
K/C | 0.6348 | likely_pathogenic | 0.672 | pathogenic | -0.84 | Destabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | N |
K/D | 0.709 | likely_pathogenic | 0.7737 | pathogenic | -0.252 | Destabilizing | 0.999 | D | 0.78 | deleterious | None | None | None | None | N |
K/E | 0.3043 | likely_benign | 0.3751 | ambiguous | -0.092 | Destabilizing | 0.989 | D | 0.484 | neutral | N | 0.40148106 | None | None | N |
K/F | 0.761 | likely_pathogenic | 0.8131 | pathogenic | -0.207 | Destabilizing | 1.0 | D | 0.772 | deleterious | None | None | None | None | N |
K/G | 0.5431 | ambiguous | 0.6161 | pathogenic | -1.148 | Destabilizing | 0.999 | D | 0.694 | prob.neutral | None | None | None | None | N |
K/H | 0.3442 | ambiguous | 0.372 | ambiguous | -1.319 | Destabilizing | 1.0 | D | 0.74 | deleterious | None | None | None | None | N |
K/I | 0.4127 | ambiguous | 0.4672 | ambiguous | 0.338 | Stabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
K/L | 0.3954 | ambiguous | 0.4473 | ambiguous | 0.338 | Stabilizing | 0.999 | D | 0.694 | prob.neutral | None | None | None | None | N |
K/M | 0.2419 | likely_benign | 0.2787 | benign | 0.058 | Stabilizing | 1.0 | D | 0.735 | prob.delet. | N | 0.487390678 | None | None | N |
K/N | 0.4229 | ambiguous | 0.5007 | ambiguous | -0.783 | Destabilizing | 0.998 | D | 0.653 | neutral | N | 0.459894645 | None | None | N |
K/P | 0.7009 | likely_pathogenic | 0.7403 | pathogenic | 0.008 | Stabilizing | 1.0 | D | 0.794 | deleterious | None | None | None | None | N |
K/Q | 0.1868 | likely_benign | 0.2097 | benign | -0.748 | Destabilizing | 0.997 | D | 0.646 | neutral | N | 0.457547773 | None | None | N |
K/R | 0.0929 | likely_benign | 0.0961 | benign | -0.72 | Destabilizing | 0.217 | N | 0.18 | neutral | N | 0.431131963 | None | None | N |
K/S | 0.5136 | ambiguous | 0.5872 | pathogenic | -1.455 | Destabilizing | 0.996 | D | 0.569 | neutral | None | None | None | None | N |
K/T | 0.2186 | likely_benign | 0.2619 | benign | -1.073 | Destabilizing | 0.998 | D | 0.74 | deleterious | N | 0.395325878 | None | None | N |
K/V | 0.3868 | ambiguous | 0.4281 | ambiguous | 0.008 | Stabilizing | 0.999 | D | 0.778 | deleterious | None | None | None | None | N |
K/W | 0.6974 | likely_pathogenic | 0.7612 | pathogenic | -0.082 | Destabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | N |
K/Y | 0.5856 | likely_pathogenic | 0.6493 | pathogenic | 0.195 | Stabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.